Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme203g00001 ATGGGAGGTGTCGGTAAAACGACCCTTGCACAACTTATTTATAATGATGAAAAAGTTCAAGAGCACTTTGATCTCAAAACCTGGACTTGTGTATCGGAGGATTTTGATATTTTGAGAGTAACTAAAACGCTCCTTGAATCTGTCACTTCAAAAGCATGGGAAACAAATAATCTTGATTTTCTTCGAGTTGAATTAAAGCAAAATTTGAGGGACAAAAGATTTTTGATTGTGTTGGACGACTTATGGAATGACAATTACAATGACTGGGATGAACTCGTAACTCCCTTGATTAGTGGAAAATCTGGAAGCAGGGTGATCATCACAACACGCCAAGAAAAAGTTGCAGTTGTTGCACACACATTTCCCATTCATAAATTAGAACCTTTATCTGATGAAGACAGCTGGTCTCTACTCTCCAAGCATGCATTTGGAGGTGAATACTTTTGTGAAACCAACCTAGAAGCAATTGGTAGGAAGATAGCAAGAAAGTGTGGTGGATTGCCAATCGCTGCGAAAGCACTTGGGGGGCTTTTGCGTTCAAAGATAGATGCAAAGGAGTGGACTGCTATTTTGAAAAGCGAGATATGGAAAATAGAGAAGGATAATATTCTCCCTGCTTTACTTCTGAGTTATCAATATCTTCCCTCTAATTTGAAAAGGTGTTTTGCCTATTGCTCAATTTTTCCGAAAGACTATCAACTTAATAGGAAGCAATTGGTTTTGATGTGGATGGCTGAAGGCTTTCTCGAACATGATCAAGGCGAAGAAGTTGCTGAGGACATAGGTGATTACTACTTTGCTGAACTGTTATCAAGATCATTGATTCAACAATTGCATGATGATTCTAGAGGACAGAAGTTCGTCATGCATGACCTTGTCAATGATTTAGCTGGAGTAGTATCTGGAAAATGTTGTTGCAGACTTGATTCTGGTGGTGATATCTCTGAAAAGGTTCGTCATCTATCATATAATCAAGAAATGTATGATATTTTTGAAAAGTTTAAGATTATCTACAAATTCAAATGTTTGAGAAGCTTCGTACCCATTGAATTCGGGTATAATCAAAATAGCTTATCTAGAAAGGTGGTTGATGATTTGCTACCTACACTTGGAAGGTTGCGGGTGTTATCGTTATCAAAATATAGTAACATCACAACTCTACCAGATTCAATTGGCAATTTGGTTCAGTTGCGCTATCTAGATCTCTCACACACTGAAATCAAAAGTTTGCCTGACACAATATGCAACCTCTACTATTTGCAAACTTTGATTTTAGAATGGTGCTCAAATATCACTGAATTGCCAGAACATGTTGGAAAGTTAATTAATTTACGTCATCTTTACATCGATTCAACGAACATAAAGGAATTGCCAAAGCAAATCGTTGAACTAGAAAATCTTCAAACTTTAACTGTTTTTATAGTAGGAAAGCAGAATGTTGGTTTGAGTGTTAGAGAGCTTGCAAGGTTTCCTAAGCTACGGGGAAAATTAGTCATCAAGAACCTGCATAATGTTATCGATGTTGGTGAGGCATGTGATACCAACTTGAAGAGAAAAAACTGTATTGAGGAACTAACATTACAATGGGGCGATGAAATTGATGACTCACTTAAAGGGAAAAATGTGCTTGATATATTGCAACCACCAATAAACCTGAAGAGATTGAACATTGGCTTATATTGTGGGACAAGCTTTCCAAGTTGGTTGGGAGATTCTTTATTTTCTAACATGGTGTCTCTTTGCATTAATAAATGTGAATATTGCATGACACTTCCACCACTAGGACAACTACCTTCTTTGAAGGACCTGAGCATAGAAGGTATGCTGATGTTAGAGACAATTGGTCCAGAGTTCTACGGCATGGATGGAGGAGGTTCCAATTATTCATTCCAACCTTTTCCATCCCTCGATAAACTGACATTCAATAAGATGTTAAATTGGAAGGAATGGATTTCATTTCAAGATGGCATATTTCCTTTTCCCCGTCTTAAAACTCTGACGTTATATAATTGTCCTGAACTGATAGGACATTTGCCTCCCCATCTTTCTTCCATAGAAGAAATTGATTTAACGAATTGTGATCGTCTCGTGGAAACACCACCTACTCTTCATTGGCTCTCCTCAATAAAAGATATAAATATTTTGGGAGATTTCAATTCTACTGAAAAGACCCAGTGCATGTTGCTTGAGAGTGATTCACCGTGTCTACTGCAGAGCTTAACGATCCGTTACTTTGATACAATCTTCTCTATCCCCAAAATGATTTTGAGAAGCACTTGTCTTCAACGCTTGAGACTCCACGATGTTCCGTCTCTCACTGCATTTCCAAGGGATGGTCTACCCACTTCATTGCAGTCACTTATTATTATTGATTGTGGGAAGTTATCATTCTTGCCTTTTGAAACGTGGAGCAATTATACATCACTTTCGGATTTGTCTTTAACGCGTAGCTGTGATGCACTTTCCTCCTTCCCATTGGACGGTTTCCCTAAGCTCCAAAATCTCTACGTTGATGGTTGTAAGGGTTTGGAATCTATTTTTATTTCAGAAAATTCTTCCCATCTCCCCTCAACCCTCCAAGTACTTTATGTCTATTCCTGTGAAGTCCTTAGATCACTGCCTGAACGGATGGACACCCTCACTGCTCTTGAAAGTTTGAGTCTATGCTATCTTCCAAAACTAGAGTTATCACTATGTAAAGGATCTATCTTACCTCCCAAATTACAATCAATTTGTATTAGATCTGTGAGAATAAAAAAGATTCCGCCGCTAAAGGAATGGGGTTTCCAACGCCTTACTTCTCTTTCAAAATTGTATATTGGAGGTGCTGATGATATTGTTAACACCTTGCTGAAGGAGCAGTTGCTTCCCATTTCCTTAGTGTTTCTGTCAATAAGTAATCTTTCTGACATCAAATGCTTAGAAGGAAACGGGTTTCGACACCTCTCCTCTCTTGAAACACTTCATTTTCACATTTGTCAACGGCTTGAGTCCTTGGCAGATATCAGGTTACCTTCCTCTCTCAAAACACTTACTTTTAACGGCTGTCCAAGACTCGAGTCATTTCCAGAAGACAATCTCCCATCCTCTCTCAAGCTACTGGGCATTTATAATTGTCCTCTGTTAGAAGCAAGGTATGAAAATGAGAGAGGGGAAAGTTGGTCCAAAATTGCTCACATCCCTGTGATAAAGATAAACAACAAAGAGACGATATGA 3216 0.3843 MGGVGKTTLAQLIYNDEKVQEHFDLKTWTCVSEDFDILRVTKTLLESVTSKAWETNNLDFLRVELKQNLRDKRFLIVLDDLWNDNYNDWDELVTPLISGKSGSRVIITTRQEKVAVVAHTFPIHKLEPLSDEDSWSLLSKHAFGGEYFCETNLEAIGRKIARKCGGLPIAAKALGGLLRSKIDAKEWTAILKSEIWKIEKDNILPALLLSYQYLPSNLKRCFAYCSIFPKDYQLNRKQLVLMWMAEGFLEHDQGEEVAEDIGDYYFAELLSRSLIQQLHDDSRGQKFVMHDLVNDLAGVVSGKCCCRLDSGGDISEKVRHLSYNQEMYDIFEKFKIIYKFKCLRSFVPIEFGYNQNSLSRKVVDDLLPTLGRLRVLSLSKYSNITTLPDSIGNLVQLRYLDLSHTEIKSLPDTICNLYYLQTLILEWCSNITELPEHVGKLINLRHLYIDSTNIKELPKQIVELENLQTLTVFIVGKQNVGLSVRELARFPKLRGKLVIKNLHNVIDVGEACDTNLKRKNCIEELTLQWGDEIDDSLKGKNVLDILQPPINLKRLNIGLYCGTSFPSWLGDSLFSNMVSLCINKCEYCMTLPPLGQLPSLKDLSIEGMLMLETIGPEFYGMDGGGSNYSFQPFPSLDKLTFNKMLNWKEWISFQDGIFPFPRLKTLTLYNCPELIGHLPPHLSSIEEIDLTNCDRLVETPPTLHWLSSIKDINILGDFNSTEKTQCMLLESDSPCLLQSLTIRYFDTIFSIPKMILRSTCLQRLRLHDVPSLTAFPRDGLPTSLQSLIIIDCGKLSFLPFETWSNYTSLSDLSLTRSCDALSSFPLDGFPKLQNLYVDGCKGLESIFISENSSHLPSTLQVLYVYSCEVLRSLPERMDTLTALESLSLCYLPKLELSLCKGSILPPKLQSICIRSVRIKKIPPLKEWGFQRLTSLSKLYIGGADDIVNTLLKEQLLPISLVFLSISNLSDIKCLEGNGFRHLSSLETLHFHICQRLESLADIRLPSSLKTLTFNGCPRLESFPEDNLPSSLKLLGIYNCPLLEARYENERGESWSKIAHIPVIKINNKETI 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme203g00001 1071 Gene3D - 210 298 IPR036388 -
Trme203g00001 1071 Gene3D Ribonuclease Inhibitor 899 1048 IPR032675 -
Trme203g00001 1071 FunFam Probable disease resistance protein At1g61300 1 120 - -
Trme203g00001 1071 SUPERFAMILY L domain-like 736 1046 - -
Trme203g00001 1071 ProSiteProfiles Leucine-rich repeat profile. 396 417 IPR001611 GO:0005515
Trme203g00001 1071 SMART LRR_typ_2 370 393 IPR003591 -
Trme203g00001 1071 SMART LRR_typ_2 394 417 IPR003591 -
Trme203g00001 1071 SMART LRR_typ_2 441 464 IPR003591 -
Trme203g00001 1071 Pfam NB-ARC domain 1 192 IPR002182 GO:0043531
Trme203g00001 1071 Gene3D - 128 209 IPR042197 -
Trme203g00001 1071 Gene3D - 1 121 IPR027417 -
Trme203g00001 1071 PRINTS Disease resistance protein signature 164 178 - -
Trme203g00001 1071 PRINTS Disease resistance protein signature 680 696 - -
Trme203g00001 1071 PRINTS Disease resistance protein signature 68 82 - -
Trme203g00001 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 225 IPR027417 -
Trme203g00001 1071 SUPERFAMILY L domain-like 288 720 - -
Trme203g00001 1071 FunFam Probable disease resistance protein At1g63360 211 298 - -
Trme203g00001 1071 PANTHER DISEASE RESISTANCE PROTEIN RP 1 786 IPR044974 GO:0006952
Trme203g00001 1071 Gene3D Ribonuclease Inhibitor 337 732 IPR032675 -
Trme203g00001 1071 Gene3D Ribonuclease Inhibitor 733 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme203g00001 Trme-Chr203 23 3238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme203g00001 384 479 WRKY Transcription Factor Family AT4G12020 38.144 4.42e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme203g00001 - - mtr:11408421 1431.39