Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme203715g00001 ATGACTACAAAACCTGAACTGTATTACGGTTTGAATGATCAGGGTCGACTTAAAGGTGGAAAAGTTGCTGCTATAAAAGTTCTTTCGGCTGAATCAAAACAAGGTGTGAAGGAGTTCTTGACGGAGATCAATGTGATCTCCGAAATAGAGCATGAAAATTTGGTCAAGTTATATGGTTGTTGTGTGGAAAAAAATAGCAGGATTTTAGTCTACAATTACCTCGAGAATAATAGCCTTTCACGAACTCTTTTAG 253 0.3715 MTTKPELYYGLNDQGRLKGGKVAAIKVLSAESKQGVKEFLTEINVISEIEHENLVKLYGCCVEKNSRILVYNYLENNSLSRTLL 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme203715g00001 84 ProSiteProfiles Protein kinase domain profile. 1 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme203715g00001 84 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 14 84 - -
Trme203715g00001 84 SUPERFAMILY Protein kinase-like (PK-like) 16 83 IPR011009 -
Trme203715g00001 84 Pfam Protein tyrosine and serine/threonine kinase 21 83 IPR001245 GO:0004672|GO:0006468
Trme203715g00001 84 Gene3D Phosphorylase Kinase; domain 1 7 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme203715g00001 Trme-Chr203715 9 261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme203715g00001 14 84 Receptor kinase-like Gene Family AT1G07650 61.972 5.11e-24 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme203715g00001 PK_Tyr_Ser-Thr 1.4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme203715g00001 - - gmx:100782320 132.88