Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme203641g00001 ATGCGGAGATCCACCACTGTAGTAGAACTCCTTGGAAAATTTCTGGTGGAATTAAATGAATTGGTTGAAACTCAGATGACAAGAAATATAAGAAATGTAGTGTTTACGGTTCCGGTTTCGCTCAGTCGATTGCAGCTAAACCGGATAAATCGCGCTTGTGCGATGGCTGGTATTAAAGTTATCGGACTGATGCCTCAACCAACAGCGGTGGCTTTGTGGTACACAACAACAACTGCAGGCTTCTGCTTCTTCTCATGA 258 0.438 MRRSTTVVELLGKFLVELNELVETQMTRNIRNVVFTVPVSLSRLQLNRINRACAMAGIKVIGLMPQPTAVALWYTTTTAGFCFFS 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme203641g00001 85 SUPERFAMILY Actin-like ATPase domain 5 75 IPR043129 -
Trme203641g00001 85 Gene3D - 1 81 - -
Trme203641g00001 85 Pfam Hsp70 protein 8 74 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme203641g00001 Trme-Chr203641 99 356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme203641g00001 9 80 Calmodulin-binding Proteins AT1G16030 30.556 4.90e-07 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme203641g00001 K09489 - gmx:100809773 93.5893