Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme203528g00001 GAGGGTAGTAGAAAGCGAGGTACACAGAATATAGAGAACTGTAAAGAGTTTCTTAAAAGGAAAAAGAATAAGAAAACTCGGGAGCCATCCGTTGGTGGTTCGAGTTCTTATTTTGCTGCTTTCCCGTCTCTAAAAGAGGATGGTAATCGCGAATCAGTTAATTTTGTGCTTATGACATTTGATTCGATTCGAAGAAGGCTCTGTCAACTTGAAGAATCGAAGGAACTTAGCAATGCACTTGCCAAGCATCTTAGAGCAAGTAATGCTTTGACGTGTCATGGGGTTAAAACAAACACGAGGAGAAGAGCAGGAGCGGTTCCTGGGGTTGAGGTTGGGGATGTTTTCTTTTTCCGAATGGAAATGTGTCTTGTGGGTTTACATGGTCAATCAATGGGTGGAATTGATTACATGAACATCAAGGATGGGTCTAAGGAG 435 0.4207 EGSRKRGTQNIENCKEFLKRKKNKKTREPSVGGSSSYFAAFPSLKEDGNRESVNFVLMTFDSIRRRLCQLEESKELSNALAKHLRASNALTCHGVKTNTRRRAGAVPGVEVGDVFFFRMEMCLVGLHGQSMGGIDYMNIKDGSKE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme203528g00001 145 ProSiteProfiles YDG domain profile. 104 145 IPR003105 -
Trme203528g00001 145 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 19 139 - -
Trme203528g00001 145 SUPERFAMILY PUA domain-like 88 139 IPR015947 -
Trme203528g00001 145 Gene3D - 86 143 IPR036987 -
Trme203528g00001 145 Pfam SAD/SRA domain 103 139 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme203528g00001 Trme-Chr203528 2 436 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme203528g00001 45 145 Su(var)3-9 homologs AT5G04940 55.340 1.52e-32 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme203528g00001 K24405 - gmx:100800651 162.925