Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20331g00001 GTGGACCCATTCCCTTGGAATACCATGCTTGTCATTGATATCATGGTAGGGTTAGAGCAACCCATCCTTACTGCCATTGTTGTATATAATCTCCACCGATCTCCATATTTTTGGGACCGCCCTGATGACTTTGAGCCTGAGAGATTTCTAGTGCAAAACAAGAATGAAGAAATTGAAGGGTGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGATTATATCGGATTTTGCGTTCTTGCCTTTTGGCGGCGGACCTCGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCCACTGTAGCACTGACTATGTTACTACAGAATTTCGACGTGAAATTGAAGGGGACCCCTGAATCGGTCGAACTAGTTACCGGAGCAACTATCCATACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCTTCTGTACATTGA 456 0.4496 VDPFPWNTMLVIDIMVGLEQPILTAIVVYNLHRSPYFWDRPDDFEPERFLVQNKNEEIEGWAGFDPSRSPGALYPNEIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVKLKGTPESVELVTGATIHTKNGLWCNLRKRSSVH 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20331g00001 151 PRINTS E-class P450 group IV signature 32 50 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme20331g00001 151 PRINTS E-class P450 group IV signature 94 112 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme20331g00001 151 SUPERFAMILY Cytochrome P450 26 147 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme20331g00001 151 PANTHER CYTOCHROME P450 FAMILY 4 24 147 - -
Trme20331g00001 151 Pfam Cytochrome P450 26 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme20331g00001 151 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 87 96 IPR017972 GO:0005506|GO:0016705
Trme20331g00001 151 Gene3D Cytochrome P450 11 151 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20331g00001 Trme-Chr20331 188 969 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20331g00001 26 148 Cytochrome P450 AT4G15110 81.301 1.35e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20331g00001 K24543 - gmx:606504 251.136