Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme203046g00001 ATGCATAGGGATCTTAAGCCTGAGAATTTCTTGTTTGATACTCCCGGTGAAGATGCTCAAATGAAAGCTACAGATTTTGGTCTATCTGTGTTCTACAAACCAG 103 0.3981 MHRDLKPENFLFDTPGEDAQMKATDFGLSVFYKP 34
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme203046g00001 34 Pfam Protein kinase domain 1 33 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme203046g00001 34 Gene3D Transferase(Phosphotransferase) domain 1 1 34 - -
Trme203046g00001 34 SUPERFAMILY Protein kinase-like (PK-like) 1 33 IPR011009 -
Trme203046g00001 34 ProSiteProfiles Protein kinase domain profile. 1 34 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme203046g00001 Trme-Chr203046 316 418 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme203046g00001 1 34 EF-hand Containing Proteins AT4G09570 85.294 2.31e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Trme203046g00001 Pkinase 6.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme203046g00001 K13412 - gmx:547887 75.8701