Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme202956g00001 GACACAAACTTGGGAATGATTGATGAAGCACTCTCAATTTTGTTGTTACTTGTGTTGAATCCTGAAGGGAGACAAGAGATTGGACAGTTATCTTTCATTGAAATTCTTGTTGGGTTTACTAGAGAAGGGACTCCTAAGAATAAGGAATGTGCAGCTTCTGTTCTTCTTGAGTTGTGTTCAAGTAATTCTTCTTTCACTTTGGCAGCACTTCAGTTTGGAGTTTATGAGCATTTAATTGAGATGAAACAAAGTGGAACAAATAGAGCACAGAGGAAAGCAAATGCAATTTTAGATCTCATTAGCAAGAGTGAGCAAATTTAA 321 0.3645 DTNLGMIDEALSILLLLVLNPEGRQEIGQLSFIEILVGFTREGTPKNKECAASVLLELCSSNSSFTLAALQFGVYEHLIEMKQSGTNRAQRKANAILDLISKSEQI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme202956g00001 106 Gene3D - 2 105 IPR011989 -
Trme202956g00001 106 SUPERFAMILY ARM repeat 6 101 IPR016024 -
Trme202956g00001 106 PANTHER U BOX DOMAIN-CONTAINING 6 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme202956g00001 5 106 U-box Gene Family AT5G42340 80.392 4.30e-44 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme202956g00001 - - tpra:123891904 196.823