Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20282g00001 ATTTCTAGATCCATTGGTGACGTATACCTGAAGAAGGCAGAATTTAACAAGGAACCACTGTATGCTAAGTTTCGCCTCCGGGAAACTTTTAAAAGTCCAATTTTGAGCTCCGAACCATCAATTTCTGTTCATGAACTACAAGAGCATGATCAATTTCTGATATTTGCCTCTGATGGTCTTTGGGAACACCTTAGCAATCAGGATGCTGTTGATATAGTTCAAAATCACCCTCACAGTGGGAGTGCTCGGAAGCTGATCAAAGCGGCTATGCTGGAAGCGGCAAAGAAAAGAGAGATGAGGTACTCTGATCTGAAGAAAATTGACCGTGGTGTCCGCCGTCATTTCCATGACGACATCACAGTTGTCGTTGTATTTCTTGACTCAAATCTTGTCAGTAGAGCAAGCACAGTAAGAGGTCCTCCTCTGTCACTGAGAGGAGCTGGTGTTCCCCTACCATCTAGATCTTTGGCACCAATGGAACTTCCAGGTCCTGGCTGA 498 0.4478 ISRSIGDVYLKKAEFNKEPLYAKFRLRETFKSPILSSEPSISVHELQEHDQFLIFASDGLWEHLSNQDAVDIVQNHPHSGSARKLIKAAMLEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRASTVRGPPLSLRGAGVPLPSRSLAPMELPGPG 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20282g00001 165 CDD PP2Cc 1 126 IPR001932 -
Trme20282g00001 165 ProSiteProfiles PPM-type phosphatase domain profile. 1 126 IPR001932 -
Trme20282g00001 165 Pfam Protein phosphatase 2C 2 95 IPR001932 -
Trme20282g00001 165 SUPERFAMILY PP2C-like 1 127 IPR036457 -
Trme20282g00001 165 PANTHER PROTEIN PHOSPHATASE 1 124 IPR015655 GO:0004722|GO:0006470
Trme20282g00001 165 Gene3D - 1 136 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20282g00001 Trme-Chr20282 295 1286 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20282g00001 1 162 PP2C-type Phosphatase Gene Family AT4G38520 72.840 1.59e-87 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20282g00001 K01102 - gmx:100777920 290.426