Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme202737g00001 CAAAGTGAGGTGACAAGCCCAGACGATCCTCTGCCTGAACCTCCAAGGTGTACAGTTCATTCATTTTGCAAGACACTTACAGCTTCTGACACTAGCACTCATGGAGGTTTCTCTGTTCTTCGAAGACATGCAGATGATTGTCTACCACCACTGGACATGACTCAGCAGCCACCATGGCAAGAATTGGTTGCAACTGATTTGCACGGGAATGAATGGCATTTTCGACATATTTTTCGCG 238 0.4664 QSEVTSPDDPLPEPPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIFR 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme202737g00001 79 Gene3D - 19 79 IPR015300 -
Trme202737g00001 79 CDD B3_DNA 20 79 IPR003340 GO:0003677
Trme202737g00001 79 SUPERFAMILY DNA-binding pseudobarrel domain 11 79 IPR015300 -
Trme202737g00001 79 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 11 79 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme202737g00001 Trme-Chr202737 18 358 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme202737g00001 1 79 B3 DNA Binding Superfamily AT1G59750 88.608 5.30e-46 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme202737g00001 K14486 - gmx:100793224 174.481