Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme2026g00001 ATGAAGTTCTCTTTTCCTGTATTTCTTTTGGTTTTGTTAATGGGTCTATGTGATGCATCTTCTTCTTTGAAGAACACTTACATAGTGCACGTTGCAAAATCTGAAATGCCAGAGAGTTTTGAGCACCATACTTTATGGTATGAGTCTTCTTTACAATCTGTATCTGAATCAGCTGAAATGATGTACACTTATGAAAACGCGATTCATGGTTTCTCAACCAGATTAACTGAAGAAGAAGCGCGTTTGCTTGAGAGCCAAACGGGGATTCTAGCTGTTTGGCCTGAAGTGAAATATGAGCTTCATACAACAAGAACTCCTCTGTTTCTTGGCCTCGATAAAACCGCCGACATGTTCCCNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNACTGGATTTGGTCCTATACCCACAACATGGAAAGGCGCGTGTGAATCAGGAACAAACTTCACAGCTTCAAACTGCAACAAAAAACTGATCGGAGCAAGATATTTCTCAAAAGGTTGTGAAGCCATGTTAGGTCCTATCGATGAAACAACAGAGTCCAAATCTCCACGAGACGACGACGGCCATGGCACACACACCTCAACAACAGCAGCAGGATCAGTCGTTACCGGTGCAAGTCTCTTTGGTTACGCTTCCGGAACAGCGCGTGGGATGGCCACGCGCGCTAGAGTTGCAGCTTACAAAGTTTGTTGGAAAGGTGGTTGTTTCAGTTCAGACATTTTAGCTGCTATTGATAAAGCTATTTCAGACAATGTTAATGTTCTGTCACTTTCACTCGGCGGTGGCATGTCTGATTATTACAGAGACAGTGTTGCTATTGGTGCTTTTGCTGCAATGGAGAAAGGAATTCTCGTTTCNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNACTACTGTTGGTGCTGGTACACTTGATCGTGATTTCCCTGCTTCTGTTAGTCTCGGTAACGGATTAAACTATTCCGGCGTGTCGCTTTATCGAGGCAACGCTTTGCCGGAATCTCCGTTACCGTTGATTTACGCAGGGAATGCTACTAATGCTACCAATGGGAATTTATGTATGACGGGAACTTTATCGCCGGAGTTAGTNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGAGCTGGTGGCGGATACTCATTTGTTACCGGCAACGGCGGTTGGTGAGAAAGAAGGTGATGCAATCAAGAAATATTTATTTTCCGATGCGAAACCGACGGTTAAGATTTTGTTTCAAGGAACAAAGGTGGGAGTGCAACCTTCTCCGGTTGTCGCGGCGTTTAGTTCACGTGGTCCTAACTCAATCACACCGCAGATCTTGAAACCTGATCTAATCGCGCCAGGTGTCAACATCTTAGCTGGGTGGTCAAAGGCAGTGGGACCAACTGGTTTAGCAGTTGATGAAAGACGCGTGGATTTCAATATTATCTCTGGTACATCTATGTCCTGTCCTCACGTGAGTGGTTTAGCCGCTCTGATTAAATCGGCTCACCTGGAATGGAGTCCAGCTGCTGTTAGATCGGCTCTTATGACAACGGCTTATACGGCTTACAAAACCGGTAACAAATTGCAAGATAGTGCAACTGGTAAACCCTCCACGCCGTTTGATCATGGATCAGGACACGTGGATCCTGTTGCTGCTCTTAATCCTGGGTTGGTTTATGATTTAACGGTGGATGATTATTTAGGTTTTCTCTGTGCGTTAAACTACACAGCAACGCAAATAACAGCTCTGGCAAGGAGAAAGTTCCAGTGTGACGCGGGTAAAAAGTACAGTGTGTCTGATCTTAATTACCCTTCATTTGCCGTTGTTTTTGATACAATGGGTGGGGCTAATACAGTTAAACACACGAGAATTCTCACAAACGTGGGACCCGCGGGAACTTACAAGGCTTCCGTAACGTCTGATTCAAAAGCGGTGAAAATAACGGTTGATCCGGAAGAGTTGAGTTTCAAGGAGAATGAGAAGAAACCGTTTACAGTAACGTTTACTTCTTCGGGTTCAACACCTCAGAAGGTGAATGGATTTGGAAGATTGGAATGGAGTAATGGGAAGAATGTGGTTGGAACTCCAATTTCGATTAGTTGGGATTAG 2262 0.3948 MKFSFPVFLLVLLMGLCDASSSLKNTYIVHVAKSEMPESFEHHTLWYESSLQSVSESAEMMYTYENAIHGFSTRLTEEEARLLESQTGILAVWPEVKYELHTTRTPLFLGLDKTADMFPXXXXXXXXXXXXXXXXXXXXXXXXXXTGFGPIPTTWKGACESGTNFTASNCNKKLIGARYFSKGCEAMLGPIDETTESKSPRDDDGHGTHTSTTAAGSVVTGASLFGYASGTARGMATRARVAAYKVCWKGGCFSSDILAAIDKAISDNVNVLSLSLGGGMSDYYRDSVAIGAFAAMEKGILVSXXXXXXXXXXXXXXXXXXXXTTVGAGTLDRDFPASVSLGNGLNYSGVSLYRGNALPESPLPLIYAGNATNATNGNLCMTGTLSPELVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELVADTHLLPATAVGEKEGDAIKKYLFSDAKPTVKILFQGTKVGVQPSPVVAAFSSRGPNSITPQILKPDLIAPGVNILAGWSKAVGPTGLAVDERRVDFNIISGTSMSCPHVSGLAALIKSAHLEWSPAAVRSALMTTAYTAYKTGNKLQDSATGKPSTPFDHGSGHVDPVAALNPGLVYDLTVDDYLGFLCALNYTATQITALARRKFQCDAGKKYSVSDLNYPSFAVVFDTMGGANTVKHTRILTNVGPAGTYKASVTSDSKAVKITVDPEELSFKENEKKPFTVTFTSSGSTPQKVNGFGRLEWSNGKNVVGTPISISWD 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme2026g00001 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 534 544 IPR023828 -
Trme2026g00001 753 CDD Peptidases_S8_3 98 570 IPR034197 -
Trme2026g00001 753 Coils Coil 390 390 - -
Trme2026g00001 753 MobiDBLite consensus disorder prediction 191 213 - -
Trme2026g00001 753 Coils Coil 430 430 - -
Trme2026g00001 753 Pfam Peptidase inhibitor I9 26 101 IPR010259 -
Trme2026g00001 753 Gene3D - 621 752 - -
Trme2026g00001 753 Gene3D Peptidase S8/S53 domain 146 617 IPR036852 GO:0004252|GO:0006508
Trme2026g00001 753 Gene3D - 332 473 - -
Trme2026g00001 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 16 101 IPR037045 -
Trme2026g00001 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 749 IPR045051 -
Trme2026g00001 753 CDD PA_subtilisin_like 338 465 - -
Trme2026g00001 753 FunFam Subtilisin-like protease SBT1.9 16 101 - -
Trme2026g00001 753 ProSiteProfiles Serine proteases, subtilase domain profile. 48 604 - -
Trme2026g00001 753 SUPERFAMILY Subtilisin-like 166 608 IPR036852 GO:0004252|GO:0006508
Trme2026g00001 753 PRINTS Subtilisin serine protease family (S8) signature 533 549 IPR015500 -
Trme2026g00001 753 PRINTS Subtilisin serine protease family (S8) signature 202 215 IPR015500 -
Trme2026g00001 753 Pfam Subtilase family 179 577 IPR000209 GO:0006508|GO:0008236
Trme2026g00001 753 Pfam Fibronectin type-III domain 651 750 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme2026g00001 Trme-Chr2026 283 2544 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme2026g00001 8 752 Subtilisin-like Serine Gene Family AT5G67360 63.952 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme2026g00001 - - gmx:100815413 1056.97