Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme202391g00001 TGCAAGAGCATCAATCCTGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTTTGCTCAGTGAAGACGTTAAGAATGTTCCAAATTTGGTGCTGCAAGATGTTACCCCTTTGTCACTTGGTAAGGGCGTAGCAGGAAATGTCATGAGTGTGGTGATTCCTAGAAACACCTCTATTCCTGTTAGGAAGACAAAAACGTATCGTACAGTTGAAGATAACCTATCTTCTGTCCCAATTAAGGTTTATGAGGGAGAGAGAATCGTTGCGAGTGAGAACAACTTGCTTGGTTTGTTTAATCTCTCAGTTCGTCATGCACCTCGTGGCCTTCCTATTCAAGTATGCTTTAGTATAGATGTTGATGGTATATTAAACGTCTCTGCAGAGGAAGAAAGCAGTG 400 0.43 CKSINPDEAVAYGAAVQAALLSEDVKNVPNLVLQDVTPLSLGKGVAGNVMSVVIPRNTSIPVRKTKTYRTVEDNLSSVPIKVYEGERIVASENNLLGLFNLSVRHAPRGLPIQVCFSIDVDGILNVSAEEESS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme202391g00001 133 Pfam Hsp70 protein 1 132 IPR013126 GO:0005524|GO:0140662
Trme202391g00001 133 PRINTS 70kDa heat shock protein signature 4 24 - -
Trme202391g00001 133 PRINTS 70kDa heat shock protein signature 109 125 - -
Trme202391g00001 133 PRINTS 70kDa heat shock protein signature 30 49 - -
Trme202391g00001 133 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 16 133 IPR029047 -
Trme202391g00001 133 PANTHER HEAT SHOCK PROTEIN 70KDA 1 132 IPR013126 GO:0005524|GO:0140662
Trme202391g00001 133 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 27 131 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme202391g00001 Trme-Chr202391 38 437 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme202391g00001 1 133 Calmodulin-binding Proteins AT3G12580 61.765 4.30e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme202391g00001 K03283 - gmx:102667578 176.407