Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20228g00001 TTGAATACATATGTGTTAATCTCAAATTTCAAGCTTGCATACAATCTTCTAAGACGTGCAGATGGAACATTCAACAGAGATTTAGCAGAGTTTCTTGACAGAAAGGTACCGGCAAACGCGGTTCCCGTCGATGGAGTCTTTTCGTTCGATCATGTCGATCGAAACTCTGGTCTTTTCAATCGAGTTTACTTACCATCTTCAGAAAATGAACCACAATGGGGTGTCAAAGATTTAGAGAAACCATTGAGTACAACAGAAATTGTTCCTGTCATAGTATTCTTCCATGGTGGAAGCTTCTCACACTCCTCAGCTAACAGTGCTATCTATGACACATTTTGTAGAAGACTAGTAAGCGTTTGTAAAGCTGCTGTTGTTTCGGTTAATTACCGAAGATCGCCGGAGCATCGGTTTCCATGTGCTTATGAAGATGGTTGGAATGCACTCAAATGGGTTAAGTCAAGAAAATGGCTTCAAAGTGGGAAGGAAAAGAAAGTTTATATTTACATGGCTGGTGATAGTTCTGGTGGAAACATTGTTCATCATGTGGCAGTGAAAGCTTCTGAAGAAAAAGAAGAAGGAATTGAGGTTTTAGGGAACATTCTTCTTCATCCACTGTTTGGTGGTGAGAAAAGAACAGATTCTGAAATGAGATTAGATGGAAAGTACTTTGTTAGATTACAAGATCGTGATTGGTATTGGAGAGCTTTTTTACCAGAAGGTGAAGATAGAGACCACCCTGCTTGTAATCCGTTTGGTCCTAAAGGGGAAAAAAATCTTAAAGGACTTGATAAGTTTCCTAAAAGTCTTGTTTGTGTTGCTGGTTTGGATCTTCTACAAGATTGGCAATTAGCTTATGTGGATGGTTTGAGGAATTTTGGTCAACAAGTTAAACTTCTTTTCCTTAAGGAGGCTACTATTGGCTTTTACTTCTTGCCTAATAATGATCATTTCTATTGCCTTATGGAGGAAATCAAGAACTTTGTTAATCCTAACTGTTAA 999 0.3834 MNTYVLISNFKLAYNLLRRADGTFNRDLAEFLDRKVPANAVPVDGVFSFDHVDRNSGLFNRVYLPSSENEPQWGVKDLEKPLSTTEIVPVIVFFHGGSFSHSSANSAIYDTFCRRLVSVCKAAVVSVNYRRSPEHRFPCAYEDGWNALKWVKSRKWLQSGKEKKVYIYMAGDSSGGNIVHHVAVKASEEKEEGIEVLGNILLHPLFGGEKRTDSEMRLDGKYFVRLQDRDWYWRAFLPEGEDRDHPACNPFGPKGEKNLKGLDKFPKSLVCVAGLDLLQDWQLAYVDGLRNFGQQVKLLFLKEATIGFYFLPNNDHFYCLMEEIKNFVNPNC 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20228g00001 332 Pfam alpha/beta hydrolase fold 91 309 IPR013094 GO:0016787
Trme20228g00001 332 FunFam Gibberellin receptor GID1 1 330 - -
Trme20228g00001 332 Gene3D alpha/beta hydrolase 1 329 IPR029058 -
Trme20228g00001 332 PANTHER ARYLACETAMIDE DEACETYLASE 26 302 - -
Trme20228g00001 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 167 179 IPR033140 -
Trme20228g00001 332 SUPERFAMILY alpha/beta-Hydrolases 44 329 IPR029058 -
Trme20228g00001 332 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 91 107 IPR002168 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20228g00001 Trme-Chr20228 361 1359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20228g00001 1 329 Carbohydrate Esterase AT3G63010 73.333 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20228g00001 K14493 - gmx:100788435 567