Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20225g00001 ATGGAACCGGGTGCGAGAATAGCTAGCCCTTCTGGGGTTGTGGTTAAGAATAGAAGTTCTTCGGGGTGTTTGATTGTTAGGAAGAAAGGAGATGGTTTGGGTGGTGGAGTTGGTGGTGGTTCGAGTTCCCGGAAGCAGTTTGAATCGAAGAAGGTGAGGAAAAAGCCGAAGGTGGATTCCAGTGATTCGGAATCAAGCGGGGAGTTACTTATGCCGTCTGCTAGGAGGATTGGCCCTGAGACTATTCGAGTTTGTAATAGTTTGAGTGCTCTTGAGCGAGGTGGTAATGTTGGTAGTGGTGAAATTAGTAGGAAGAGGGAGAGAATGGAGCAAATTAGGCGTAATGGGGATGGCATGGTTGAGGGGAATGGCTTGGAGAGAAGGGATAAGAAAGTTAAGTTGGATGTGTTTGATTTTGATGAATATGATGGTTTGGGTGCAGAAAGGATGAGAAGGAGGCAATTTGATAATGATGGGATTGGTTTAGGAGGAGGAGGAGGAGGAAGGTTTATGGGAACAATGCATTCTGGTAGAGGTAGCATTGATCGGGAATTTGAAACTGGTTCAAGCAAACGCATTGTGGATAAGAGAAAAACTTCCTATTATGACAAGGGAAGTGGTTCACATCTTGGAGATAGTGCTGACCATAGTCGGATAAAGATGAAAAAGGATGGAACTCAGCGTCCTCTGCCCTTGATGAAGGAGAAGTTTAACTCTGACGAGTCCATTAGGGTTCAGGGGAAAAATGGTGTTTTGAAGGTGATGGTTAATAAGAAGAAGGTGGGTGGGTCAGTAGAACACTATGATCATCGCAAACCAGTAGAAAGCAGACAAAGTTTAAGGGCTGAGGGCACCTCTAAGAGGAATGTTCCAATCCGCCCTTCATCACACTTAGAAACAAAATCTGCTGAGAAACAGGGTTTACTTGTTAGGCCAGAGAAGAAACAGATAACAACAAAAAAATCCTTGTCAAGTAAGGAGGATAGTAAGGGCGATGAACAGGATTCAGATAACAATGACACATCAATGAATCTGGAAGTAAAAAATATTAAAGCTCACACATCTTCAAAAAAGATAACCTCTGAAAATGAACAGACTCCCGTACATGACAAGCTCCCAACTACAAAATCGAGTGAAGGGAAAATCAGGCGAGGTAGTGGCACAGAAAAGCAGAAACTACGGGAACAAATACGTGAGATGCTTCTGAATAAAGGCTGGACCATAGACTATCGCCCACGAAGGAATAGAGACTATTTAGATGCAGTTTACATTAATCCTGCAGGAACAGCTTATTGGTCCATCATCAAGGCCTATGATGCACTTCAAAAGCAATTGATTGAGGATGATCAACAGGCCAAG 1359 0.4341 MEPGARIASPSGVVVKNRSSSGCLIVRKKGDGLGGGVGGGSSSRKQFESKKVRKKPKVDSSDSESSGELLMPSARRIGPETIRVCNSLSALERGGNVGSGEISRKRERMEQIRRNGDGMVEGNGLERRDKKVKLDVFDFDEYDGLGAERMRRRQFDNDGIGLGGGGGGRFMGTMHSGRGSIDREFETGSSKRIVDKRKTSYYDKGSGSHLGDSADHSRIKMKKDGTQRPLPLMKEKFNSDESIRVQGKNGVLKVMVNKKKVGGSVEHYDHRKPVESRQSLRAEGTSKRNVPIRPSSHLETKSAEKQGLLVRPEKKQITTKKSLSSKEDSKGDEQDSDNNDTSMNLEVKNIKAHTSSKKITSENEQTPVHDKLPTTKSSEGKIRRGSGTEKQKLREQIREMLLNKGWTIDYRPRRNRDYLDAVYINPAGTAYWSIIKAYDALQKQLIEDDQQAK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20225g00001 453 MobiDBLite consensus disorder prediction 99 125 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 359 373 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 1 20 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 298 337 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 25 76 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 260 392 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 374 392 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 198 229 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 88 125 - -
Trme20225g00001 453 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20225g00001 Trme-Chr20225 1 1359 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20225g00001 4 453 PHD Transcription Factor Family AT4G14920 39.871 7.81e-69 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20225g00001 - - mtr:25485216 733.791