Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme201810g00001 CTTCTCTCTTCCTACATTGATTCCGACAATTCCGGATCCAAACTCAACTCTCCCACCGCCAATAATGCAGATACCGCCAGACCTAGTCACCGCCGAAGCAACTCCGCCGATACTTCTTCTTCCTTGTTATCAGAAGGAATCGAATCTAAGAAAGCTATGTCTCCTGATAAACTCGCTCAATTGTGGACCGTTGATCCCAAACGCGCCAAGAGGATTCTGGCGAATCGTCAATCTGCAGCGCGGTCGAAAGAGAGGAAAGCTTGTTATGTGGTTGAGCTTGAAAGAAAAATTCATACTCTTCAAACTGAAGC 311 0.4662 LLSSYIDSDNSGSKLNSPTANNADTARPSHRRSNSADTSSSLLSEGIESKKAMSPDKLAQLWTVDPKRAKRILANRQSAARSKERKACYVVELERKIHTLQTEA 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme201810g00001 104 MobiDBLite consensus disorder prediction 1 47 - -
Trme201810g00001 104 Pfam bZIP transcription factor 67 103 IPR004827 GO:0003700|GO:0006355
Trme201810g00001 104 MobiDBLite consensus disorder prediction 1 59 - -
Trme201810g00001 104 Gene3D - 66 104 - -
Trme201810g00001 104 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 1 104 - -
Trme201810g00001 104 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 65 104 IPR004827 GO:0003700|GO:0006355
Trme201810g00001 104 SUPERFAMILY Leucine zipper domain 67 103 IPR046347 GO:0003700|GO:0006355
Trme201810g00001 104 CDD bZIP_plant_RF2 68 104 IPR044759 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme201810g00001 Trme-Chr201810 1 439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme201810g00001 8 104 bZIP Transcription Factor Family AT2G40620 67.010 1.21e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme201810g00001 bZIP_1 2.8e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme201810g00001 - - aprc:113852914 124.79