Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20158g00001 ATGCTTAGTGGCAAGCCATTGTTTCCTGGGAAGAATGTGGTGCACCAATTGGATCTCATGACTGACTTGCTTGGTACTCCTCCTGCTGAATCCATTTCGAGGATTCGAAATGAGAAGGCTAGAAGGTACCTTAGTAGCATGAGGAAAAAGCAACCAGTTCCATTCTCCAAAAAATTTCCAAATGTAGATCCATTGGCTCTTAATTTGCTGGAGCGTTTACTCGCTTTTGATCCTAAAGACCGTCCATCAGCTGAAGAGGCACTATCTGATCCTTATTTTCATGGTTTGTCAAATGTGGACCGTGAACCGTCCACTCAACCCATTTCGAAGCTCGAGTTTGAATTTGAGAGAAGAAAATTGACCAAAGATGATGTTCGAGAACTGATATATCGAGAGATTTTAGAGTATCATCCCCAGATGCTCCAAGAATATCTTAGTGGTGGAGATCAAACAAGCTTCATGTATCCGAGGTAG 474 0.4241 MLSGKPLFPGKNVVHQLDLMTDLLGTPPAESISRIRNEKARRYLSSMRKKQPVPFSKKFPNVDPLALNLLERLLAFDPKDRPSAEEALSDPYFHGLSNVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLSGGDQTSFMYPR 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20158g00001 157 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme20158g00001 157 Gene3D Phosphorylase Kinase; domain 1 117 139 - -
Trme20158g00001 157 Gene3D Transferase(Phosphotransferase) domain 1 1 116 - -
Trme20158g00001 157 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 146 - -
Trme20158g00001 157 FunFam Mitogen-activated protein kinase 117 139 - -
Trme20158g00001 157 SUPERFAMILY Protein kinase-like (PK-like) 1 137 IPR011009 -
Trme20158g00001 157 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20158g00001 Trme-Chr20158 91 1111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20158g00001 1 156 MAP Kinase Gene Family AT1G73670 83.974 1.42e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20158g00001 - - tcc:18604309 291.582