Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20145g00001 ATGATAGAAAAATGGTCTAAAAATCAAGGACTTGAATTGTGCAATGTTATTAGTTATATTAATGATGAAGGTGCTAAAGAAGCTGATCAGAATCACTTTTTATGTTTACTTGAGAAAATGTCATCAACACTTAGTGATAAAAAAGAAGCTGCAAAACAACTTAGATTGTTGACAAAGAAGCATCCTTGTTTTCGAGTACTTTTTTGCGATTTCGAAAATGCAATTCCTCAATTGCTTAAGCCAATTTGTGAAGGAGATAGTATTAACCATGATCTTCAAGAAGATGTGATCACAACACTTCTCAATATCTCAATTCATGACAACAATAAGAAACTAGTAGCCGAAACTCCAATGGTAATTCCAATCCTTATGAATGCATTAAGATGTGGAACAATCGAAACACGAGCCAATGCTGCAGCAACCCTTTTCACGTTATCAGCACTAGACTCAAACAAAGAGCTTATAGGAAAATCAAATGCCTTAAAACCGCTTATCGACCTATTGGAAGAAGGGAATCCCTTAGTCATGAAAGATGTTGCTTCAGCAATTTTCACTCTATGTATGATGCACGACAACAAAGCAAGAGCAGTGAAAGACGGCGCAGTTAGAGTCATTATGACGAAGATGGAAAACCGAGTTCACGTCGATGAATTGCTAGCTATCCTTGCACTACTTTCGACTCATCAGAAGGCTGTTCTTGAAATGGCTGAGCTCGGAGCTGTTCCTTGCTTGCTAAGCATCATGCGAGAGAGCTCGTGCGAACGCAATAAG 771 0.3826 MIEKWSKNQGLELCNVISYINDEGAKEADQNHFLCLLEKMSSTLSDKKEAAKQLRLLTKKHPCFRVLFCDFENAIPQLLKPICEGDSINHDLQEDVITTLLNISIHDNNKKLVAETPMVIPILMNALRCGTIETRANAAATLFTLSALDSNKELIGKSNALKPLIDLLEEGNPLVMKDVASAIFTLCMMHDNKARAVKDGAVRVIMTKMENRVHVDELLAILALLSTHQKAVLEMAELGAVPCLLSIMRESSCERNK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20145g00001 257 Gene3D - 12 257 IPR011989 -
Trme20145g00001 257 PANTHER U BOX DOMAIN-CONTAINING 1 256 - -
Trme20145g00001 257 SUPERFAMILY ARM repeat 41 254 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20145g00001 Trme-Chr20145 1 771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20145g00001 1 257 U-box Gene Family AT3G07360 59.924 1.21e-98 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20145g00001 - - gmx:100809408 397.512