Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20128g00001 GAAGAAATGGCAAAACTGCGCTCAGCTTACGTAAGGATGACAGGTAAGGAGCTTGATGGATTGCAGATTAAAGAACTGCAGGACCTAGAAAATCAACTGAGTGAAGCGATATTAACTGTCAAAACCAAGAAGGAACAAGTGCTTGTTGAACAGCTTGAGAAATCAAGGTTACAGGAGCAAATGGCTTTGGCAGAGATTGAAGATCTGCGTAAACAACTTGAGGAGCTAAAGAATAAAAGAAATTCAGAGTTAGGGTCGTCATCATCAGATCATGGTAGCAAGCACAGATCATTGAGGATGAGAGCTTCCAAAAGCTAG 318 0.4151 EEMAKLRSAYVRMTGKELDGLQIKELQDLENQLSEAILTVKTKKEQVLVEQLEKSRLQEQMALAEIEDLRKQLEELKNKRNSELGSSSSDHGSKHRSLRMRASKS 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20128g00001 105 Coils Coil 49 86 - -
Trme20128g00001 105 MobiDBLite consensus disorder prediction 77 105 - -
Trme20128g00001 105 Coils Coil 26 46 - -
Trme20128g00001 105 ProSiteProfiles K-box domain profile. 1 79 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trme20128g00001 105 Pfam K-box region 3 73 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20128g00001 Trme-Chr20128 77 1074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20128g00001 1 78 MADS-box Gene Family AT5G13790 46.154 2.12e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20128g00001 - - tpra:123891316 147.517