Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme201222g00001 GATGACCTGCTGACTAGGTTTATGAGGAAGAAAGAATCCTATTCGGACAAGTTTCTTCAACACGTGGCATTGAACTTCATCCTAGCTGGACGTGACACGTCATCGGTTGCGTTGAGCTGGTTTTTCTGGTTGGTGATTCAAAATCCAAGGGTGGAAGAGAAGATCCTACGCGAGATATGCACGGTCTTGATGGAGACACGTGGCGCTGACATGGAAAAGTGGACGGATGAACCATTGGGATTTGAAGAAGTTGATCGTCTGGTTTATCTTAAAGCTGCCTTGTCGGAGACACTTAGGTTGTACCCTTCGGTGCCAGAGGATTCAAAGCATGTGGTGAACGATGACGTGTTGCCGGATGGAACTTTTGTTCCGGCAGGATCATCAGTGACATACTCGATATATTCAGCCGGGAGATTGAAGTCAACATGGGGTGAGGAT 438 0.4749 DDLLTRFMRKKESYSDKFLQHVALNFILAGRDTSSVALSWFFWLVIQNPRVEEKILREICTVLMETRGADMEKWTDEPLGFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVNDDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGED 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme201222g00001 146 PANTHER CYTOCHROME P450 2 146 - -
Trme201222g00001 146 Gene3D Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 PRINTS P450 superfamily signature 92 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 PRINTS P450 superfamily signature 29 46 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 SUPERFAMILY Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 Pfam Cytochrome P450 2 143 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 PRINTS E-class P450 group I signature 38 64 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 PRINTS E-class P450 group I signature 18 35 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme201222g00001 146 PRINTS E-class P450 group I signature 91 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme201222g00001 Trme-Chr201222 2 439 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme201222g00001 1 146 Cytochrome P450 AT1G01600 83.108 8.93e-84 254