Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme200912g00001 ATGATAGATTATATGGAGATAGTTCAGACAGACATTGATCCAAATTGGAGAGGAATATGTATTGATTGGGTAGTAAGCATTGTAGATTATTTCAAACTTCTTCCTGATACCCTTTATCTCGCTGTTTCGTGCATAGATAGGTTCCTATCTTTTAAACCTGTCAGCAGACTCAAGCTTCAACTGTTATGTGTTTCATCGATGTTCATTGCATCGAAGTATGAAGATACTTTCCCACCCAATGTGGAAAACTTCTGGCAG 258 0.376 MIDYMEIVQTDIDPNWRGICIDWVVSIVDYFKLLPDTLYLAVSCIDRFLSFKPVSRLKLQLLCVSSMFIASKYEDTFPPNVENFWQ 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme200912g00001 86 Gene3D - 1 86 - -
Trme200912g00001 86 Pfam Cyclin, N-terminal domain 3 84 IPR006671 -
Trme200912g00001 86 SUPERFAMILY Cyclin-like 2 85 IPR036915 -
Trme200912g00001 86 PANTHER CYCLINS 3 82 IPR039361 -
Trme200912g00001 86 FunFam G2/mitotic-specific cyclin 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme200912g00001 Trme-Chr200912 1 345 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme200912g00001 1 84 Core Cell Cycle Gene Families AT5G43080 57.143 1.64e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme200912g00001 K06627 - pda:103700824 106.686