Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme200820g00001 AATATTTTCATCTTTGACTTGGGTGGTGGGACTTTTGATGTGTCTCTCCTTACAATTAAGGATAAGGTCTTCCAAGTTAAGGCTACTGCTGGTAACACTCACCTTGGAGGAGAAGACTTTGATAATAGGATGGTGAACTACTTTGCGCAAGAGTTCAACAAGAAGAACAAGGTGGACATTACTGGAAACTCAAGAGCCTTAAGGAGGTTGAGAACGGTGTGCGAGAGAGCAAAAAGGACACTATCTTTTGCTGTTGTCACCACCATTGAGGTAGATTCTCTATTTCAAGGCATTGACTTCTTTTCAACAATCACACGTGCCAAATTTGAAGAAATCAATATGGATCTTTTCAACGAGTGTTTGGAAACTGTTAAGAGTTGTCTCACTGATGCCAAGATGGACAAGAGTGTTATACACGATGTTGTCCTTGTTGGTGGCTC 440 0.4114 NIFIFDLGGGTFDVSLLTIKDKVFQVKATAGNTHLGGEDFDNRMVNYFAQEFNKKNKVDITGNSRALRRLRTVCERAKRTLSFAVVTTIEVDSLFQGIDFFSTITRAKFEEINMDLFNECLETVKSCLTDAKMDKSVIHDVVLVGGS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme200820g00001 147 SUPERFAMILY Actin-like ATPase domain 2 147 IPR043129 -
Trme200820g00001 147 Pfam Hsp70 protein 1 147 IPR013126 GO:0005524|GO:0140662
Trme200820g00001 147 Gene3D Actin; Chain A, domain 4 38 118 - -
Trme200820g00001 147 FunFam Heat shock 70 kDa 36 119 - -
Trme200820g00001 147 PRINTS 70kDa heat shock protein signature 10 20 - -
Trme200820g00001 147 PRINTS 70kDa heat shock protein signature 138 147 - -
Trme200820g00001 147 PANTHER HEAT SHOCK PROTEIN 70KDA 1 147 IPR013126 GO:0005524|GO:0140662
Trme200820g00001 147 ProSitePatterns Heat shock hsp70 proteins family signature 2. 4 17 IPR018181 -
Trme200820g00001 147 Gene3D - 1 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme200820g00001 Trme-Chr200820 1 440 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme200820g00001 1 147 Calmodulin-binding Proteins AT3G12580 76.871 7.76e-81 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme200820g00001 K03283 - gmx:102667578 253.062