Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme200783g00001 ATGGGTGTTCTTCCGTTGAACGGAAAGGTAAAAGACACATTTGCGGTGGTGAAACGTTCTAGTGATCCGTACAATGATTTTAGAACTTCGATGGTTGAAATGATTATTGAGAAACAAATATTTTCACCAAGTGATTTGGAGAATCTTTTACAGTGTTTTCTTTCACTCAATTCGCATCATCATCACAAGATCATTGTTGAAGTTTTCACAGAGATTTGGGAAGCTCTTTTCTCTGACTGGTTATGA 246 0.3659 MGVLPLNGKVKDTFAVVKRSSDPYNDFRTSMVEMIIEKQIFSPSDLENLLQCFLSLNSHHHHKIIVEVFTEIWEALFSDWL 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme200783g00001 81 Pfam Transcriptional repressor, ovate 20 77 IPR006458 -
Trme200783g00001 81 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 9 78 IPR038933 GO:0045892
Trme200783g00001 81 ProSiteProfiles OVATE domain profile. 16 75 IPR006458 -
Trme200783g00001 81 NCBIfam uncharacterized plant-specific domain TIGR01568 14 77 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme200783g00001 Trme-Chr200783 61 306 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trme200783g00001 Ovate 8.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme200783g00001 - - cam:101496006 163.696