Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20069g00001 ATGCAATTACAAATGAAGGATCCAGAGGAGCATCAAGTCAAATCAAGGCCTCTACAAAAATTTGCAGAGCATAGAAGATGGAGCAAWAAAAGAAGMAGCCAAATCAAGACAGATAAATCACAAGAAGCAGGACATGATGATTCAAAACTGGTTCCCTRTCCAACTTCCAAGAAGAGTCTTGTGTTTTCTAGCAGGCCTGGCTATGGCCAACTAGGGACAAAGTGCATCATCAAAGCCAACCACTTTCTTGTAGATATATCAGTCTCTGATTTAAGCCATTACAATGTTAAAATAATACCTGAAGTCAGTTCTAGTAAAACAAGAAAGGCTGTCATATCTGAGCTTGTGAGGCTTCATAGGAACACTGATTTGGCCAAGAGGCTGCCTGCGTATGATGGAGGAAGAAATCTTTACACTGCTGGTTTGCTACCTTTTACATATAAAGAATTTAGTGTAATATTGAGTGACGATGATTACGTTACCGGCGGCATTAGGGAACGAGAATTTAAGGTAGCAATCAAGTTTGCAAGTAGTCTTAGAATGCAACAACTTAGGGAACTTCTAAGTGGGAAAAAAGTCGACACTCCACAAGAAGCACTTACTGTCTTTGACATTGTGTTGAAGGAAGTTGCAGCTCAAAGGTGCATTTTCAGCATTATTTTGCAGTTGTTATTGTTGCTTCACAATTCTTATGAGTTGTCTCCTTATAAACCCTTGGTGATTCTGATTATTTTGCTTGTTTCTTGTCATTTAATGTTCCATGCTTAG 768 0.3867 MQLQMKDPEEHQVKSRPLQKFAEHRRWSXKRXSQIKTDKSQEAGHDDSKLVPXPTSKKSLVFSSRPGYGQLGTKCIIKANHFLVDISVSDLSHYNVKIIPEVSSSKTRKAVISELVRLHRNTDLAKRLPAYDGGRNLYTAGLLPFTYKEFSVILSDDDYVTGGIREREFKVAIKFASSLRMQQLRELLSGKKVDTPQEALTVFDIVLKEVAAQRCIFSIILQLLLLLHNSYELSPYKPLVILIILLVSCHLMFHA 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20069g00001 255 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 51 216 - -
Trme20069g00001 255 Pfam N-terminal domain of argonaute 74 207 IPR032474 -
Trme20069g00001 255 MobiDBLite consensus disorder prediction 1 56 - -
Trme20069g00001 255 MobiDBLite consensus disorder prediction 7 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20069g00001 Trme-Chr20069 23 1311 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20069g00001 57 214 Eukaryotic Initiation Factors Gene Family AT5G43810 55.000 3.00e-56 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20069g00001 K11593 - gmx:100813485 281.182