Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20055g00001 TTATCTTCAAATGAGTTGGAGACTCTTAACAACATTGATGGTTTTGTTGCAGCATATCAAGACAGAACTGCAACCATGGACACCACACATACCTTTGAATTTCTCTCCCTAGATTCTCCAAGTGKACTATGGCATGCTTCAAATTTCGGAGACGATATCATTGTTGGTGTTATTGATTCTGGTGTTTGGCCAGAGAGTCAAAGCTTTAAAGATGATGGCATGACAAAGAAAATTCCAAACAAATGGAAAGGAACATGTGAATCTGGCCAAGAATTCAATACCTCTATGTGTAACTTCAAATTGATTGGAGCTAGATATTTCAACAAAGGTGTGATTGCTTCAAATCCAAATGTTACAACAATCTACATGAACTCAGCTAGAGATATTGTAGGACATGGAACTCACACATCATCAACTGTTGCAGGTAACTATGTTAATGGAGCTTCTTATTTTGGTTATGCAAAAGGAGTAGCAAGAGGCATTGCACCAAAAGCTAGGCTTGCCATGTACAAAGTGATTTGGGAAGAGGGTCTTTTGGCTTCTGATGTTTTGGCCGGAATGGACCAAGCAATTATTGATGGTGTTGATGTGATTTCAATTTCAATGGGATTTGATGAT 618 0.3835 LSSNELETLNNIDGFVAAYQDRTATMDTTHTFEFLSLDSPSXLWHASNFGDDIIVGVIDSGVWPESQSFKDDGMTKKIPNKWKGTCESGQEFNTSMCNFKLIGARYFNKGVIASNPNVTTIYMNSARDIVGHGTHTSSTVAGNYVNGASYFGYAKGVARGIAPKARLAMYKVIWEEGLLASDVLAGMDQAIIDGVDVISISMGFDD 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20055g00001 206 Gene3D Peptidase S8/S53 domain 28 206 IPR036852 GO:0004252|GO:0006508
Trme20055g00001 206 PRINTS Subtilisin serine protease family (S8) signature 128 141 IPR015500 -
Trme20055g00001 206 PRINTS Subtilisin serine protease family (S8) signature 50 69 IPR015500 -
Trme20055g00001 206 ProSiteProfiles Serine proteases, subtilase domain profile. 31 206 - -
Trme20055g00001 206 SUPERFAMILY Subtilisin-like 27 205 IPR036852 GO:0004252|GO:0006508
Trme20055g00001 206 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 203 IPR045051 -
Trme20055g00001 206 Pfam Subtilase family 50 203 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20055g00001 Trme-Chr20055 510 1363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20055g00001 1 206 Subtilisin-like Serine Gene Family AT5G67090 49.057 6.71e-64 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20055g00001 - - mtr:11416905 384.415