Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20053g00001 ATGGATTTTGAAGGTGAAGGTATTAGCACACCAAAGAGGGAAATGGAAGGAGAAGGAGGTGTGATGAGTTCAAAGATGAAGGGTGCAGGAAACCAAAGCAGCAAAGATATGATTTTCAGAGCTGATAAGATTGATCTCAAGAGTTTGGATGCTCAATTGGAAAAGCACTTAAGTAAGGTTTGGTCAAGAAGTGCCACCTTCAATGAGTCAAAAAGGCCTAGAGAAGAGTGGGAGATTGATTTGGCCAAATTGGATTTAAGGTATATTGTTGCTCATGGTGCTTATGGTACTGTCTATAGAGGCACATATGATACTCAAGATGTTGCAGGTATATATTTCCTTGCACTATGTATATGA 357 0.395 MDFEGEGISTPKREMEGEGGVMSSKMKGAGNQSSKDMIFRADKIDLKSLDAQLEKHLSKVWSRSATFNESKRPREEWEIDLAKLDLRYIVAHGAYGTVYRGTYDTQDVAGIYFLALCI 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20053g00001 118 Gene3D Phosphorylase Kinase; domain 1 72 113 - -
Trme20053g00001 118 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20053g00001 Trme-Chr20053 687 1043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20053g00001 1 109 MAP Kinase Kinase Kinase AT3G22750 54.128 6.29e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20053g00001 - - gmx:100803917 177.563