Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme20043g00001 ATGGTGACAAAATTTCTCTGTGGAGGTTTTACAATTGGAATGGGGATGTCACATGTTTCTTGTGATGGATTTGGTGTATCTCAATTCTTCAAAGCAATTGTTGAACTTTCAATTGGAAAAAGCGAGCCATCGGTGAAACCTGTGTGGGAAAGAGAGAGACTAGTTGGTTCAATAACTAAACAANCATTTCCATTATTCCCCATGAACAAAGAATCTATTGCATTTTCGCCGTTTTTGAATCAAACCAATAGTACAACAGATATTAAGCAATATTGTTTTAAAGTGGAGGGTGAAATGATAACAAAACTTAAGTTGAGTTTAATGAAGGAAAGTGAAAAAATAAGGTTCACAACTTTTGAATCACTTGCTGGTTATGTGTGGAGGTCAAGAGCAGGAGCCTTAAAACTTAGCAACAATGGGAAAACAATGTTGAATATGTTAGTTGGGATTAGACGAAATATGAAGGGTTATAATCCCTTGCCTGAAGGGTATTGTGGCAATTCTACTGTGGATGGAAAAGTTGTGCTAAAAGTTAGTGAGCTCATTGAAATGCCGCTCTATGAAATTGTTAAGCTGATCAAAGAAACTAAAAACGTTGCTTCGACCACTGATTATGTCACAAATTCGATCAACACTTTAGAGACGATTAGTCCAGATGAGGGTTTCAGCATGGAATTGGACGCTAGCGGTGCAGTAATGGTTCTAACAGAGTGGAAGCATTTGGGTTTTATGGAAAGTGTAGATTTTGGAGTGAATGAACTGGTGAATTTAGTATCTGCACCTTGCAAGATGCTCGCAACCGTGGACTTGTGCATTTTCATGCCTCCTAATAAATTTGATGATGATGATCCATTAATGAAAGGAGGTATTAAGATCTTTACATCACTACCTGTTGCTTCCATGCCGAAATTTAGGGATGAAATTGAAGCTTTAAAGGTTCTTTATTGA 948 0.3724 MVTKFLCGGFTIGMGMSHVSCDGFGVSQFFKAIVELSIGKSEPSVKPVWERERLVGSITKQXFPLFPMNKESIAFSPFLNQTNSTTDIKQYCFKVEGEMITKLKLSLMKESEKIRFTTFESLAGYVWRSRAGALKLSNNGKTMLNMLVGIRRNMKGYNPLPEGYCGNSTVDGKVVLKVSELIEMPLYEIVKLIKETKNVASTTDYVTNSINTLETISPDEGFSMELDASGAVMVLTEWKHLGFMESVDFGVNELVNLVSAPCKMLATVDLCIFMPPNKFDDDDPLMKGGIKIFTSLPVASMPKFRDEIEALKVLY 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme20043g00001 315 PANTHER ACYL TRANSFERASE 4 1 309 - -
Trme20043g00001 315 Gene3D - 1 65 IPR023213 -
Trme20043g00001 315 Gene3D - 77 307 IPR023213 -
Trme20043g00001 315 Pfam Transferase family 2 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme20043g00001 Trme-Chr20043 361 1308 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme20043g00001 2 219 Monolignol Biosynthesis Gene Families AT5G48930 26.339 4.89e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme20043g00001 K20240 - gmx:100801843 317.005