Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19988g00001 ATGCTTAAGATAGCTATGTTACCCTCACCGCTTGATTCTTCATATCTTAGCACAAGCGCGATAGTTGCACTTTGTGTATTCTTCGCACTCCTCTGNNNTNNNNNNNNNNTTGGCCACCTTCTTGAAGAGAATCGATGGGCCAATGAATCCATCACTTCTCTCCTTCTTGGTTTGTGTTCTGGAGTGGTGGTGTTGCTGGTGACCAAATTCCATAGTGCCGAGATTCTAATATTCAACGAAGACTTGTTCTTTCTTTACTTGCTTCCACCAATCATTTTCAATGCTGGTTTCCAAGTCAAGAAGAAACAGTTCTTCAGGAATTTCACTACTATACTTCTGTTTGGAGTCCTTGGAACAGTTATTTCTTTCTGTCTTATATCACTTGGTGCCTTTCTGCTCTTTAATACGATTGGAATAACTAACCTCGATATAAAAGATCATCTAG 445 0.3888 MLKIAMLPSPLDSSYLSTSAIVALCVFFALLXXXXXXGHLLEENRWANESITSLLLGLCSGVVVLLVTKFHSAEILIFNEDLFFLYLLPPIIFNAGFQVKKKQFFRNFTTILLFGVLGTVISFCLISLGAFLLFNTIGITNLDIKDHL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19988g00001 148 Pfam Sodium/hydrogen exchanger family 48 137 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trme19988g00001 148 PANTHER SODIUM/HYDROGEN EXCHANGER 21 147 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trme19988g00001 148 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trme19988g00001 148 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Trme19988g00001 148 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19988g00001 19 148 Antiporters AT3G06370 60.000 5.16e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19988g00001 K14724 - ccaj:109808094 205.297