Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme199872g00001 ATGGAGGAAGTAAAAGTGCCTCATTCTGTAGATTTGCAGGTTGGAGAACCAAGGTTTGTATTCCATGCTAAAACAATTCAAAGAATGGAACTAATGGTATTAAGCACATTAGGATGGAAAATGCAGGCTTTAACTCCTTGTTCCTTCATAGACTATTTCCTTGCTAAGATCAGTTGCGAAAAGCATGCCGAAAAGTCATCGATTGCAAGATCAGTACAGCTTATCCTAAACATAATCAAGG 241 0.3817 MEEVKVPHSVDLQVGEPRFVFHAKTIQRMELMVLSTLGWKMQALTPCSFIDYFLAKISCEKHAEKSSIARSVQLILNIIK 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme199872g00001 80 SUPERFAMILY Cyclin-like 1 41 IPR036915 -
Trme199872g00001 80 Gene3D - 22 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme199872g00001 Trme-Chr199872 11 367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme199872g00001 1 80 Core Cell Cycle Gene Families AT2G22490 61.250 6.64e-28 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme199872g00001 K18810 - gmx:100794010 128.642