Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme199729g00001 ATGCAACTAACTCAACTTCTTAGCCATCTCGAGATTGAGAAAAAACAAGGGGAGGAGATAGATCATGTGAGGAAAGCTAGGCAAATGCAATTTTGGTGGGAAAGCCCTATTGATGAACTTGGCTTGAATGAATTGCTCCAACTAAAGGTTTCCATTGAGGACCTAAAGAAGAATCTTGNAAAAATTGCTAGCAAATGCATGATGGAACAATCGAACTTGTCTTCACCAAATATTGGGGTTAATGGATTTGGACGTTATGATGCCTTTGAGAACAAACCAGGTGTTGGGATTAATATTACTTCAACCTTTCCTAATCCCTACTATCTTGGTTTTCGACATGGATATCTTTGA 351 0.3846 MQLTQLLSHLEIEKKQGEEIDHVRKARQMQFWWESPIDELGLNELLQLKVSIEDLKKNLXKIASKCMMEQSNLSSPNIGVNGFGRYDAFENKPGVGINITSTFPNPYYLGFRHGYL 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme199729g00001 116 Gene3D - 1 77 - -
Trme199729g00001 116 Coils Coil 45 59 - -
Trme199729g00001 116 Coils Coil 61 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme199729g00001 Trme-Chr199729 38 388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme199729g00001 2 98 Type I MADS-box Gene Family AT5G60440 38.776 2.71e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme199729g00001 - - tpra:123905348 167.162