Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19971g00001 ATTGGAGTAAATGTCCTTGTTGAGCGAAGCCTGGTAACTATTGATGATAGGAACAGAGTTAGAATGCATGATTTGTTGCGTGATATGGGAAGAGAAATCATTCGCAAGAAATCACCAAAGGAGCCTGAGGAGCGTAGTAGGTTGTGGTTTGATAAAGATGTGCTTGATGTATTATCAGAGGAGACTGGAACAAAAACTGTTGAGGGATTGACTTTGAAGTTGGCAAGAGAAAATGCAAAATGCTTTAGTACTAAAGCATTCAGGAAGATGAAAAGACTCAGATTGCTTCAACTTGGTGCTTTTATCAAGGAAATTTAG 318 0.3868 IGVNVLVERSLVTIDDRNRVRMHDLLRDMGREIIRKKSPKEPEERSRLWFDKDVLDVLSEETGTKTVEGLTLKLARENAKCFSTKAFRKMKRLRLLQLGAFIKEI 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19971g00001 105 SUPERFAMILY "Winged helix" DNA-binding domain 2 58 IPR036390 -
Trme19971g00001 105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 96 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19971g00001 Trme-Chr19971 88 736 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19971g00001 1 98 WRKY Transcription Factor Family AT4G12020 37.755 2.87e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19971g00001 - - lja:Lj0g3v0331109.1 162.54