Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19966g00001 ATGCGCGACGGACACTTGCTTAAGACAAGTTGTGGCAGCCCCAACTATGCAGCTCCTGAGGTTCTCTCTGGGAGATTGTATGCTGGACCTGAAGTAGATGTCTGGAGCTGTGGTGTTATTTTATATGCTCTTCTTTGTGGAGAACTTCCTTTTGATGATGAAAACTTTGCAAACCTCTTCAACAAAATGAAGGGAGGAATATTCACTTTTCCTAGTTGTCTGTCATCGGGTGCTAGAGAATTGATATCAAAGATGCTGGAAGCTAACCCTATGAAGAGGATAACCATACCTGAGATCCGACAACATCCATGGTTCCAACTCAGACTTCCGCGTTATTTAACTGTGCCATCGCCCGATACAATGCAACAAGCTAATGAGAACTCTAGTTTTAGCCAAATGCGTGAAGTTGAAAGAAAATGGGCTCTTGGGCTTCAGTCTCGAGCTCATCCTCGTGAAATAATGACCGAG 468 0.4423 MRDGHLLKTSCGSPNYAAPEVLSGRLYAGPEVDVWSCGVILYALLCGELPFDDENFANLFNKMKGGIFTFPSCLSSGARELISKMLEANPMKRITIPEIRQHPWFQLRLPRYLTVPSPDTMQQANENSSFSQMREVERKWALGLQSRAHPREIMTE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19966g00001 156 SUPERFAMILY KA1-like 126 156 IPR028375 -
Trme19966g00001 156 PANTHER SERINE/THREONINE KINASE 6 130 - -
Trme19966g00001 156 ProSiteProfiles Protein kinase domain profile. 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19966g00001 156 Gene3D Transferase(Phosphotransferase) domain 1 1 153 - -
Trme19966g00001 156 SMART serkin_6 1 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19966g00001 156 Pfam Protein kinase domain 6 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19966g00001 156 SUPERFAMILY Protein kinase-like (PK-like) 4 131 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19966g00001 Trme-Chr19966 75 1344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19966g00001 1 106 CBL-interacting serine-threonine protein kinases AT2G26980 53.774 1.23e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Trme19966g00001 Pkinase 5.2e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19966g00001 K07198 - qsa:O6P43_004448 224.172