Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme199584g00001 ATGCATAAAAGAAAGGAGGATTGTTCTACAGCACAACAACTTGGTGTGACGTGCTTAGCAGCCTATACAGCTGGTGCTGTTGGTACTGTAATTTCCAACCCTGCTGATAATGTCATGACCAGTCTTTATAAAAAAAAGGCTGAATCTGCTATGCAGGCTATCAAGAACATTGGGTTCATAAACCTGTTCACTAGAAGTCTTCCTATTCGCATTGCACTTCTAGGACCAGTTGTAACTTTGCAGTGGTTTCTCTATGACACTATAAAA 267 0.4045 MHKRKEDCSTAQQLGVTCLAAYTAGAVGTVISNPADNVMTSLYKKKAESAMQAIKNIGFINLFTRSLPIRIALLGPVVTLQWFLYDTIK 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme199584g00001 89 SUPERFAMILY Mitochondrial carrier 12 87 IPR023395 -
Trme199584g00001 89 ProSiteProfiles Solute carrier (Solcar) repeat profile. 12 89 IPR018108 -
Trme199584g00001 89 Gene3D Mitochondrial carrier domain 1 89 IPR023395 -
Trme199584g00001 89 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 2 89 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme199584g00001 Trme-Chr199584 9 357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme199584g00001 1 89 Chloroplast and Mitochondria Gene Families AT2G17270 70.787 2.05e-45 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme199584g00001 K15102 - fve:101304339 152.525