Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19916g00001 GTGTATGCATCATTCTCTGGAGAACCTGCATACAACGACTGGTTTTTAGCTCTCTATAATGTCTTCTTTTCATCACTTCCTGTGATCGCTCTCGGTGTATTCGACCAGGACGTATCTGCTCGGTACTGCCTCAAGTTTCCTTTGTTATATCAAGAAGGAGTTCAAAATATCCTTTTCAGCTGGCGTCGAGTACTCAGTTGGATGCTTAACGGATTCTTTAGCGCCTTATTAATTTTCTTCTTCTGCACCAAAGCAATGGAGCTACAAGCCTTCGATTCGGAGGGAAGAACCGCCGGAAGAGAAATACTAGGAGCAACCATGTACACTTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTATCTATAAGTTACTTCACCTTGATCCAACATATTTTCATATGGGGTTCCATTTTCATCTGGTACATTTTTCTCCTAATATATGGAGCAGTGCCTCAAAAGATTTCGGAAAACGCTTACAAAGTCTTCATTGAATCTCTTGCTCCTTCACCTTCCTATTGGATAGTAACATTATTTGTGGTGATCTCAACCCTTATACCATACTTCTCATACAATGCAATTCAGATGCGGTTCTTTCCAATGTATCACGAAATGGTACAGTGGATAAGGTACGAAGGGAAGACTGAGGATCCTGACTACTGTAATATGGTGCAGCAAAGATCGTTGCAGCCAACGACCGTCGGTTCAACTGCTCGCTTAGCTGCCAAGGCAAACCAATCGTTAGACAAAAATATTAAACGTAGATAA 768 0.4154 VYASFSGEPAYNDWFLALYNVFFSSLPVIALGVFDQDVSARYCLKFPLLYQEGVQNILFSWRRVLSWMLNGFFSALLIFFFCTKAMELQAFDSEGRTAGREILGATMYTCVVWVVNLQMALSISYFTLIQHIFIWGSIFIWYIFLLIYGAVPQKISENAYKVFIESLAPSPSYWIVTLFVVISTLIPYFSYNAIQMRFFPMYHEMVQWIRYEGKTEDPDYCNMVQQRSLQPTTVGSTARLAAKANQSLDKNIKRR 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19916g00001 255 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 213 - -
Trme19916g00001 255 Pfam Phospholipid-translocating P-type ATPase C-terminal 2 200 IPR032630 -
Trme19916g00001 255 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 200 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19916g00001 Trme-Chr19916 71 838 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19916g00001 2 247 Primary Pumps ATPases AT3G25610 71.545 7.35e-129 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19916g00001 K01530 - gmx:100781421 444.506