Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19915g00001 ATGGATAATAATTTTCTTTCACCACCAACAACTATAGCACTAACTATTGTTTTAGTGCTTCTATACAACATATGGAGGATAAAGAAACCTAGTAACAAATCTAAGGGTATGAAACCACCAGAACCATCATATGCCTTACCTTTAATAGGAGCATACCCTGCCCTTATTATTTCAAACCAAGAAGCAATCAAAGAATGTTTCACAACAAATGACAAAATCTTAGCTTCAAGACCAAAGTCAAGTCATGGAATATACCTTGGTTATAACTTTGCTGGCTTTGGTTTTGCACCTTATGGCACATATTGGAGTAAGCTAAGAAAATTAACCATGTTTGAATTACTCTCGTCTCGTCGCATAGAATCGTTGAGACATGTTTACGAATCGGAGATCGACACTTTGATTAAGGATCTATTCTTGTATGTTAAGGTTGGAAAGGTTAAGGTTGTGATTAGTGAATGGTTGGAAAGGTTAACATTTAATATAATCACAAAAATGATTTGTGGGAAAAGGTATTTTGAGTATTTACAAGATGTGGATGATGTAGAAGCACATGGACAAGTGCTTAAATCTATGAAAAGAATTGCTAAAGATTTGGATACACTTGTTGGAAGTTGGGTTGAAGAACATGTTGAGAAGAGTAAAGATGGAGTGAATGATTCAAATGAGAAACATGATTTTATTGATGTGATGCTTTCTGTGATTGAAGATGATCCTGCTTCTGGTCATAATCGTGATACTATCATCAAGGCAAATGTTATG 759 0.3465 MDNNFLSPPTTIALTIVLVLLYNIWRIKKPSNKSKGMKPPEPSYALPLIGAYPALIISNQEAIKECFTTNDKILASRPKSSHGIYLGYNFAGFGFAPYGTYWSKLRKLTMFELLSSRRIESLRHVYESEIDTLIKDLFLYVKVGKVKVVISEWLERLTFNIITKMICGKRYFEYLQDVDDVEAHGQVLKSMKRIAKDLDTLVGSWVEEHVEKSKDGVNDSNEKHDFIDVMLSVIEDDPASGHNRDTIIKANVM 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19915g00001 253 SUPERFAMILY Cytochrome P450 43 245 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme19915g00001 253 Gene3D Cytochrome P450 38 253 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme19915g00001 253 Pfam Cytochrome P450 49 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme19915g00001 253 PANTHER CYTOCHROME P450 82C3-RELATED 185 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19915g00001 Trme-Chr19915 280 1227 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19915g00001 42 253 Cytochrome P450 AT4G31940 36.255 3.16e-42 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19915g00001 - - gmx:100790675 346.28