Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme198g00001 TTAGAGTATCTACATCATGGTTGCAATCCGCCGATTGTTCACAGAGATGTTAAATCTAAAAACATCTTACTAAATGAAAAATTCCAAGGTAAACTAGCTGATTTTGGATTGTCAAAGATCTTTCCCAATGAAGGCGACACTCACGTCTTCACGGTTGTCGCTGGCACGATAGGATACCTCGACCCTGAGTACAATAGATTAAGAAGGTTGAAAGAAAAAAGTGACGTTTACAGTTTCGGCGTAGTTTTACTTGAGATAATTACAGGACAACCTGCCATAACAAAAACTGAAGAGAAAATCCATATTATTCAATGGATTGGTTCCATGCTGGTGGAAAGAGATGTAAAAGATATTGTGGATCCTAGATTACAAGGAGAATTTGATATTAACAATGCAACTAAAGCTTTGGATATTGCAATGGCTTGTGTAGCACAAACTTCCATCAATAGGCCAACCATGAGGCATGTAGTTATGGAACTGAAACAATGTTTTGAAAACAAGATCACTGATCTGTCTGACTCTAATGACACTCACGAGAGTTTACTTAGTACCTTGAATTATGAATCATTTGACAAAATTAGTGGTGAGAGCTCTCTAGCGAGGTAG 606 0.3762 LEYLHHGCNPPIVHRDVKSKNILLNEKFQGKLADFGLSKIFPNEGDTHVFTVVAGTIGYLDPEYNRLRRLKEKSDVYSFGVVLLEIITGQPAITKTEEKIHIIQWIGSMLVERDVKDIVDPRLQGEFDINNATKALDIAMACVAQTSINRPTMRHVVMELKQCFENKITDLSDSNDTHESLLSTLNYESFDKISGESSLAR 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme198g00001 201 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Trme198g00001 201 ProSiteProfiles Protein kinase domain profile. 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme198g00001 201 SMART serkin_6 1 164 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme198g00001 201 PANTHER OS07G0107800 PROTEIN-RELATED 1 164 - -
Trme198g00001 201 Pfam Protein kinase domain 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme198g00001 201 ProSitePatterns Serine/Threonine protein kinases active-site signature. 12 24 IPR008271 GO:0004672|GO:0006468
Trme198g00001 201 SUPERFAMILY Protein kinase-like (PK-like) 1 160 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme198g00001 Trme-Chr198 208 982 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme198g00001 1 163 Receptor kinase-like Gene Family AT1G51860 64.417 1.27e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trme198g00001 Pkinase 3.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme198g00001 - - psat:127087401 344.739