Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19890g00001 CTTGTAGATAGGTGCAAAAAGTTGGAGATTCTTGTAAGTGAGAAGCATTTAACATCTCTACAGAAGATCGATATCAGTGGTTGCTCAAGTCTTAGGGAATTTTCGTTGTCCTGGGATTCAATTGAAGAGTTGGATTTAAGCCATACATGCATTGAAATACTGCACTCATCCATCGGTCGTCTGAGCAAGCTTAGGAGGCTCGATTTACAAGGTTTAAGACTTAAGGATCTACCAAAAGAAATATCTTGCTTGAGATCACTTACTAAGCTTCTGCTTTCAAATTGTAATATAGTGACTAAATCAAAGTTAGAAGCCATATTTGATGGTCTAGAATCATTGAGAAGACTATATTTGCAAGATTGTGGTAACTTGCTAGAACTCCCCGAGAACATCGATTCCTTGTCATCCTTGTATGAATTAAGACTAGGTGGAAGCAATTTGAAGATGTTGCCTACAAGCATTAAGAACGTTTCAAGCCTAGAAATTATGTCCTTAGACAATTGCAAGAAGCTTGGTTGGCTGCCGGAGCTTCCTCCACACATCAAAATGCTTTCTGCTGACAACTGCACCTCATTGGTGTGCGTGATGAGTTTGAAAGCTCTTTTAAAAAGTATGAAGGGAGTGCAAAGGTATATTTCATTCAAGAATAGCATGAAATTGGATGCACCTTCACTCGACCGCATTATGGAAGATGCCACATTAGCAATGAAGAGTGTTGCATTTCACAATACTATAGCAGTTTATGACTACGGCTACAGTTATAGCACTGCTCGTGTTTGTTTACCGGGATGCAGAGTTCCAAGGCAGTTCAAATTCCGAACAATATGTTCATCTTCCTCCATTACTATTGAACCTCCCCACCTTTCCAAAACTTTTAGACTCATTTTCTCAGCTGTTGTTTCGTCATCCTATGGAATGAAGGAGCGCGATAATGATGCTATAATCAAATGCCAAAGCTATTCGGAAGATGGAAGAAGAAAGTTAGTTGGAAATATGCTTATACGGAATCATGAAATTACAGATTTGAGCATGGATCATGTTTTTGTGTGGATTAGTCCATTTTGCCGTATCTTTGATAAATCAAAGGTATTTGAATTCAGTGTTACAACTACTACTGGGGAACATAATGGCTTTTATAGTTTGAAAGAGTGTGGGATCTGTCCAATTTATTACTCAGAATTTCCAAGGATTGCAGCCGCCATGAATTTAGATAGGGACTTAGAAAGGGAAATTGCATTGAAGTTGTCACAGATGTTTGGATCAGATTTGAATGAATCAATGCAATTTGAGTCCGAATCAATTGAACGAGATTGA 1314 0.3836 LVDRCKKLEILVSEKHLTSLQKIDISGCSSLREFSLSWDSIEELDLSHTCIEILHSSIGRLSKLRRLDLQGLRLKDLPKEISCLRSLTKLLLSNCNIVTKSKLEAIFDGLESLRRLYLQDCGNLLELPENIDSLSSLYELRLGGSNLKMLPTSIKNVSSLEIMSLDNCKKLGWLPELPPHIKMLSADNCTSLVCVMSLKALLKSMKGVQRYISFKNSMKLDAPSLDRIMEDATLAMKSVAFHNTIAVYDYGYSYSTARVCLPGCRVPRQFKFRTICSSSSITIEPPHLSKTFRLIFSAVVSSSYGMKERDNDAIIKCQSYSEDGRRKLVGNMLIRNHEITDLSMDHVFVWISPFCRIFDKSKVFEFSVTTTTGEHNGFYSLKECGICPIYYSEFPRIAAAMNLDRDLEREIALKLSQMFGSDLNESMQFESESIERD 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19890g00001 437 Gene3D Ribonuclease Inhibitor 2 222 IPR032675 -
Trme19890g00001 437 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 5 98 - -
Trme19890g00001 437 SUPERFAMILY RNI-like 15 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19890g00001 Trme-Chr19890 1 1314 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19890g00001 5 169 WRKY Transcription Factor Family AT4G12020 33.929 2.20e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19890g00001 - - mtr:11419903 530.406