Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19888g00001 TTGGTTTCTGGGAAAGCTGAGATTTACATAGTAACTGTTGAAGGTGAACCTATTATAAGTTATTCTGGAGGTATTGATGAGTTTGAAGCTACTGCAGTGGAATCTGATGAAAAGATTGATACCACTAGTGAACTGGTTACTTCTTACGGTCGTCATCTTGAAAAAAGACATGATATGATTCTTGGGACGCTGTTTGAACAAGGGACATACAAGAAACTCTATAGCTATCGACATCTTATAAATGGTTTTGCTGTTCATATTTCCCCGGAACAGGTGAAGTCTTCTGTTGTTAGTTATCCTTTTGCTATTGCAGAAACTTTAAGCCATGCTTCTGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAAGAGACTTACCACACATACTCCACAATTTTTAGGGCTTCCAACTGGGGTATGGCCAACTGGAGGTGGCTTTGATAGAGCCGGAGAAGATATTGTTATTGGATTTGTAGACTCAGGGATATATCCTCATCACCCGAGTTTTGCAACTCATAATTCTGAACCATATGAGCCAGTTCCAAAGTATAGAGGTAAATGTGAAGTTGATCCAGATACTAAAAGAAATTTCTGTAATGGGAAGATTGTTGGAGCACAACACTTTGCACAAGCTGCAATAGCTTCTGGAGCATTCAACCCTTCCGTTGATTTTGCGTCTCCTCTAGATGGGGATGGACATGGAAGGTTAGAGCAAGTCATTATAACTTAA 729 0.4005 MVSGKAEIYIVTVEGEPIISYSGGIDEFEATAVESDEKIDTTSELVTSYGRHLEKRHDMILGTLFEQGTYKKLYSYRHLINGFAVHISPEQVKSSVVSYPFAIAETLSHASGVKSVERDWKVKRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNSEPYEPVPKYRGKCEVDPDTKRNFCNGKIVGAQHFAQAAIASGAFNPSVDFASPLDGDGHGRLEQVIIT 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19888g00001 242 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 2 123 IPR037045 -
Trme19888g00001 242 Gene3D Peptidase S8/S53 domain 152 234 IPR036852 GO:0004252|GO:0006508
Trme19888g00001 242 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 67 235 IPR045051 -
Trme19888g00001 242 Pfam Peptidase inhibitor I9 9 93 IPR010259 -
Trme19888g00001 242 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 155 166 IPR023827 -
Trme19888g00001 242 SUPERFAMILY Subtilisin-like 41 235 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19888g00001 Trme-Chr19888 1 1152 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19888g00001 6 234 Subtilisin-like Serine Gene Family AT2G19170 74.236 5.39e-118 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19888g00001 - - tpra:123910073 439.499