Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme198630g00001 ATGGATCTGTGTAAGTGCATCAACCCTGATGAGGCTGTTGCTTTTGGTGCAGCGGTGCAGGCCGCTTTGTTGATGATTCCTAGGAATACAACTATACCTGCAAAGGAGACATCAGAATGTGTAACACCTGAAGATAACACTTCATCAGTCTTGATCAGGGTTTATGAGGGTGAGAGAACCAGAGCTAGTGACAACATTCTGCTTGGTTCTTTTAGTCTCTCTGAGATTCCCACTCCACCTCGTGGCCATCCTCTTAAT 258 0.4574 MDLCKCINPDEAVAFGAAVQAALLMIPRNTTIPAKETSECVTPEDNTSSVLIRVYEGERTRASDNILLGSFSLSEIPTPPRGHPLN 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme198630g00001 86 Pfam Hsp70 protein 2 24 IPR013126 GO:0005524|GO:0140662
Trme198630g00001 86 Pfam Hsp70 protein 25 84 IPR013126 GO:0005524|GO:0140662
Trme198630g00001 86 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 24 84 IPR029047 -
Trme198630g00001 86 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 18 85 IPR029047 -
Trme198630g00001 86 PANTHER HEAT SHOCK PROTEIN 70KDA 2 84 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme198630g00001 Trme-Chr198630 30 375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme198630g00001 2 84 Calmodulin-binding Proteins AT1G56410 47.826 2.38e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme198630g00001 K03283 - gmx:102667578 105.145