Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19861g00001 CAAGTTATCAAAGGATGGGATGTAGGAATCAAAACAATGAAGAAAGGTGAAAATGCCCTTTTCACCATTCCACCTGAGTTAGCTTATGGTGAATCCGGTTCTCCTCCAACTATTCCTCCCAATGCTACTCTACAATTTGATGTTGAGCTGCTGTATTGGACTAGTGTGAAGGATATATGTAAGGATGGAGGATTGTTTAAGACAATAGTTAAGGAGGGGGAGAAATGGGAAAACCCCAAGGATCCTGATGACGTCTTTGTTAAGTATGAAGCACGTCTTGACGATGGAACGCTTGTGGCAAAATCTGATGGGGTGGAATTCACTGTGAAGGAGGGTCATTTTTGTCCTGCACTGTCAAAGGCTGTTAAGACCATGAAGAAGGGAGAGAAAGTGGTCTTGACTGTGAAGCCACAATATGGATTTGGTGAGAAGGGCAAGCCAGCTCACGGTGATGAAGGTGCAGTTCCACCTAATGCAACATTGCAGATTACTCTCGA 497 0.4406 QVIKGWDVGIKTMKKGENALFTIPPELAYGESGSPPTIPPNATLQFDVELLYWTSVKDICKDGGLFKTIVKEGEKWENPKDPDDVFVKYEARLDDGTLVAKSDGVEFTVKEGHFCPALSKAVKTMKKGEKVVLTVKPQYGFGEKGKPAHGDEGAVPPNATLQITL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19861g00001 165 SUPERFAMILY FKBP-like 1 58 - -
Trme19861g00001 165 Gene3D - 1 55 IPR046357 GO:0003755
Trme19861g00001 165 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 54 IPR001179 GO:0003755
Trme19861g00001 165 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 62 162 - -
Trme19861g00001 165 Gene3D - 56 165 IPR046357 GO:0003755
Trme19861g00001 165 FunFam Peptidylprolyl isomerase 57 165 - -
Trme19861g00001 165 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 77 162 IPR001179 GO:0003755
Trme19861g00001 165 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 51 IPR001179 GO:0003755
Trme19861g00001 165 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 82 165 IPR001179 GO:0003755
Trme19861g00001 165 SUPERFAMILY FKBP-like 58 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19861g00001 Trme-Chr19861 14 793 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19861g00001 1 53 Calmodulin-binding Proteins AT3G25230 44.643 2.16e-08 50.4