Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19847g00001 GGACTCTCTAAGGTGTTTAAGACTAGTGATAATCCAAATGAAGAATCTACAATGATCCATGTTGATGATGGTAACGAAAAATCTGCAATCAAGGGAACAACGGGATACCTTGATCCAGAGTACTACAGATTCAGGAACTTGAATGAAAAAAGTGACATTTATAGCTATGGAGTTGTACTATTGGAATTAATCACAGGTCTCCCTGCAGTGATTAAAGGAAAGGAACCAATACACATACTTGAGTTTATAAGACCACAACTTGAAAAAGGTGACTTGAATACAATTATAGATCCAAGACTCCAAGGAAAATTTGATGTAAATTCAGGATGGAAAATTTTAAGATTAGSAATTTCATGCACTGCATCAACCTCAATTCAGAGACCAAGCATGAGTGTTGTGTTAGCTGAGCTGAAACAATGTGTTACATTGGAGTCACCTAGTGACAGGGAAATATTTGTGCCACCAAGAGATATCTATAGTGAATTTTATAGTTCATCTGATGCATTTAAATCTATAGATCGTGAATCTATGACATATTCTTTCCCAAGGTAA 552 0.3551 GLSKVFKTSDNPNEESTMIHVDDGNEKSAIKGTTGYLDPEYYRFRNLNEKSDIYSYGVVLLELITGLPAVIKGKEPIHILEFIRPQLEKGDLNTIIDPRLQGKFDVNSGWKILRLXISCTASTSIQRPSMSVVLAELKQCVTLESPSDREIFVPPRDIYSEFYSSSDAFKSIDRESMTYSFPR 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19847g00001 183 Gene3D Transferase(Phosphotransferase) domain 1 1 151 - -
Trme19847g00001 183 PANTHER OS07G0107800 PROTEIN-RELATED 26 144 - -
Trme19847g00001 183 ProSiteProfiles Protein kinase domain profile. 1 153 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme19847g00001 183 SUPERFAMILY Protein kinase-like (PK-like) 24 160 IPR011009 -
Trme19847g00001 183 Pfam Protein tyrosine and serine/threonine kinase 26 135 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19847g00001 Trme-Chr19847 3 1053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19847g00001 28 145 Receptor kinase-like Gene Family AT1G51880 49.153 2.42e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Trme19847g00001 PK_Tyr_Ser-Thr 1.6e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19847g00001 - - gmx:100779617 238.424