Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19824g00001 ATGCTTGTTAATGGAGCAAACGTACAGAACAATAACACTGGACCCATTTCTCAATCACCTGTTCCAGGAAATCCTGTTGTCTCGATACCTGCTACTAATCTTAATATCGGAATGGATTTATGGAATGCATCTCCTGCTAATGCTGAAGCCACCAAACTGAGACACAATCAATCTAGTGCCCCTGGAGCTGGTGAACAATGGATGCAACAAGATGATCGTGAGCTGAAAAGACAGAAGAGAAAACAGTCTAATCGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGCTACAAAAGAGGGTTGAGGCGTTGGGAGGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAAACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAACAATTCTATCAAG 414 0.4372 MLVNGANVQNNNTGPISQSPVPGNPVVSIPATNLNIGMDLWNASPANAEATKLRHNQSSAPGAGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENRTLREELQKLSEECEKLTSENNSIK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19824g00001 138 SUPERFAMILY Leucine zipper domain 75 131 IPR046347 GO:0003700|GO:0006355
Trme19824g00001 138 CDD bZIP_plant_GBF1 77 127 IPR045314 GO:0003700|GO:0006355
Trme19824g00001 138 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Trme19824g00001 138 Gene3D - 75 137 - -
Trme19824g00001 138 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Trme19824g00001 138 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 137 IPR004827 GO:0003700|GO:0006355
Trme19824g00001 138 Pfam bZIP transcription factor 73 134 IPR004827 GO:0003700|GO:0006355
Trme19824g00001 138 Coils Coil 85 138 - -
Trme19824g00001 138 MobiDBLite consensus disorder prediction 51 97 - -
Trme19824g00001 138 MobiDBLite consensus disorder prediction 51 65 - -
Trme19824g00001 138 PANTHER G-BOX-BINDING FACTOR 3-RELATED 10 138 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trme19824g00001 138 MobiDBLite consensus disorder prediction 1 23 - -
Trme19824g00001 138 FunFam G-box binding factor 3 75 137 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19824g00001 13 138 bZIP Transcription Factor Family AT4G36730 59.524 3.95e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme19824g00001 bZIP_1 1.8e-22 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19824g00001 K09060 - gmx:778191 226.098