Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme198228g00001 GCTGTTGTGCCGCTGCTCGGTGCGGCGTTTGTGAAAGATTATAAGGTTAGGTTGGGAGTTGTGTTTGGTGTTGTTAGTTTTGCTTTGTTTGTTTTTGGTGGGTTGAGTGGTGTTATTGGGAAAGCACCTTTGGTTAAGCCATGTTTGAGGGTTTTGATTGGTGGATGGCTTGCTATGTTTCTTACTTTTGGTTTAGCTAAGCTTGTAAACCATGGGGTGGATTTAACGCACTGCTAA 237 0.4346 AVVPLLGAAFVKDYKVRLGVVFGVVSFALFVFGGLSGVIGKAPLVKPCLRVLIGGWLAMFLTFGLAKLVNHGVDLTHC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme198228g00001 78 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 1 72 IPR008217 GO:0005384|GO:0030026
Trme198228g00001 78 Pfam VIT family 1 66 IPR008217 GO:0005384|GO:0030026
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme198228g00001 Trme-Chr198228 2 238 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme198228g00001 1 73 Nodulin-like Gene Family AT3G43660 63.514 1.35e-25 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme198228g00001 K22736 - qsa:O6P43_012275 106.686