Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme197664g00001 ATGCAGATAATGAAAAATGCTGCTGAGACACTTATACCAGTTACACTAGAGCTTGGTGGAAAAGATGCATTTATTGTTTGTGAAGATGTTGATGTGGACCATGTTGCTCAAATTGCTGTCAGGGCTGTTCTACAGTCAAGTGGGCAGAACTGTGCTGGAGCTGAACGATTGTATGTCCATAGGAACATTTATCCAGCTTTTGTCAGCAAAGTTACCAAAATCATCAAATCTGTTACAGCT 240 0.4042 MQIMKNAAETLIPVTLELGGKDAFIVCEDVDVDHVAQIAVRAVLQSSGQNCAGAERLYVHRNIYPAFVSKVTKIIKSVTA 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme197664g00001 80 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 20 79 IPR016163 GO:0016620
Trme197664g00001 80 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 44 55 IPR016160 GO:0016491
Trme197664g00001 80 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 16 23 IPR029510 GO:0016491
Trme197664g00001 80 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 19 IPR016162 GO:0016491
Trme197664g00001 80 Pfam Aldehyde dehydrogenase family 2 78 IPR015590 GO:0016491
Trme197664g00001 80 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 2 78 - -
Trme197664g00001 80 SUPERFAMILY ALDH-like 2 78 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme197664g00001 Trme-Chr197664 54 444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme197664g00001 3 80 Aldehyde Dehydrogenase Gene Family AT3G66658 78.205 9.46e-40 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme197664g00001 - - aprc:113848242 142.895