Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19759g00001 TCAGTACAAATTTTAAGAGACAAGCAAGAGTTAGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGCTCAGAAAGAATCATCTTCCTCAAGCCATTCACAGTCCAATGAGGACAGATCTACACCTTCTACCACAGATCCTAAAAAAACTGATAATGCATCTGATGCGAACAACCATCAGTTAGCTCTCGCCCTGCCTCATCAAATTGCTCCTCAGCTGCCGCCTGCAGGACCCCCACCCCAAGCTCAACCACCAAATGTGAATCAACCCACTCAACAACCCGCTTATTACATGCAGGCTGCCCCTACAGTGTCTCAGCTACCCCAGAATCAGTATATGCCTTCTGATCAACAATACCGAACCCCCCAACTACAACAAGACATGTCCCGGGTGGCTCAACAACCAACACCATCTCAAATAAACCCTCCCACACCTGTGCAACAATTTTCTCAGTACCAGCAGCAGCAGCAGCAGTGGCCTCAGCAGGTGCAACAATCCTCAATGCAACCTCAAATGAGACCCCCCTCACCTACTGTGTATCCTCCATACCAACCAAACCAAACATCAAATCCATCACCCACAGAAACACTGCCAAACAGCATGCCCATGCAAATGCCATATTCAGGGGTTCCGCAGCCAGGATCCAGCCGTGCCGATTCCATGCAATATGGATATGGTGGAACTGGTAGAACAGTTCCACAGCAACCTCCACCCCAGCAAATCAAGGGCTCATTCTCTTCACAACCTGGTGATGCGTATGGAGCTACCCACCCTCCTCCTGGTAATGCATACATGATGTATGATGGTGGTGAGGGAGGAAGGACACAGCATCCACCACCCCAACCCTCTCATTTTGCTCAATCTGGATATCCTCCAACAGGTGCTTCCCTTCAGAACCCCAATCTCATGGCCCGAAATCCTAGCCAGTCACAGTTTGCACGCAACCATCCTTACAATGAGTTGATTGAGAAATTGGTGAACATGGGATTCAGGGGTGACCACGTGGTGAGCGTGATCCAAAGGATGGAGGAGAGTGGACAGACCATAGATTTCAACTCTGTTCTTGACAGGTTGAATGTGCATAGCTCTGTTGGTCCCCAGAGAGGAGGGTGGTCAGGGTGA 1125 0.4942 SVQILRDKQELAETQKELAKLQLAQKESSSSSHSQSNEDRSTPSTTDPKKTDNASDANNHQLALALPHQIAPQLPPAGPPPQAQPPNVNQPTQQPAYYMQAAPTVSQLPQNQYMPSDQQYRTPQLQQDMSRVAQQPTPSQINPPTPVQQFSQYQQQQQQWPQQVQQSSMQPQMRPPSPTVYPPYQPNQTSNPSPTETLPNSMPMQMPYSGVPQPGSSRADSMQYGYGGTGRTVPQQPPPQQIKGSFSSQPGDAYGATHPPPGNAYMMYDGGEGGRTQHPPPQPSHFAQSGYPPTGASLQNPNLMARNPSQSQFARNHPYNELIEKLVNMGFRGDHVVSVIQRMEESGQTIDFNSVLDRLNVHSSVGPQRGGWSG 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19759g00001 374 MobiDBLite consensus disorder prediction 89 174 - -
Trme19759g00001 374 MobiDBLite consensus disorder prediction 190 252 - -
Trme19759g00001 374 Pfam UBA-like domain (DUF1421) 319 363 IPR010820 -
Trme19759g00001 374 MobiDBLite consensus disorder prediction 21 62 - -
Trme19759g00001 374 MobiDBLite consensus disorder prediction 16 295 - -
Trme19759g00001 374 MobiDBLite consensus disorder prediction 72 88 - -
Trme19759g00001 374 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 374 - -
Trme19759g00001 374 MobiDBLite consensus disorder prediction 175 189 - -
Trme19759g00001 374 Coils Coil 4 24 - -
Trme19759g00001 374 MobiDBLite consensus disorder prediction 281 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19759g00001 Trme-Chr19759 55 1179 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19759g00001 318 359 Trihelix Transcription Factor Family AT3G01560 38.095 2.04e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19759g00001 - - gmx:100810231 488.419