Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme197517g00001 ATGATGTGCGGCGGGTGCGTCTCCCGAGTCAAAAACATTCTCTCCGCCGACGACAGAGTAGACTCGGTCGTAGTCAACATGTTGACTGAAACCGCCGCTATTAAGCTTAACCTGCTCGATGAGGAATCAACGAATGTTGCGGAGAGTCTTGCTCGGAGATTGAGTGAATGCGGATTTCCGACTAAGAAGAGAGAGTCAGGTTTAGGAGTGGCGGAAAATGTCAGGAAGTGGAAGGAATTGGTGAAGAAGAAGGAGGAACTTCTTGCTAAGAGTCGTAACCGCGTCGCTTTTGCTTGGACTTTGGTTGCTTTGTGCTGTGGTTCTCACGCTTCGCATATTTTTCATTCTCTGGGGATTCACATTG 364 0.4863 MMCGGCVSRVKNILSADDRVDSVVVNMLTETAAIKLNLLDEESTNVAESLARRLSECGFPTKKRESGLGVAENVRKWKELVKKKEELLAKSRNRVAFAWTLVALCCGSHASHIFHSLGIHI 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme197517g00001 121 Coils Coil 74 94 - -
Trme197517g00001 121 ProSiteProfiles Heavy-metal-associated domain profile. 1 62 IPR006121 GO:0046872
Trme197517g00001 121 Gene3D - 1 66 - -
Trme197517g00001 121 SUPERFAMILY HMA, heavy metal-associated domain 1 59 IPR036163 GO:0046872
Trme197517g00001 121 CDD HMA 1 60 IPR006121 GO:0046872
Trme197517g00001 121 Pfam Heavy-metal-associated domain 1 59 IPR006121 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme197517g00001 1 66 Primary Pumps ATPases AT4G33520 37.143 2.92e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme197517g00001 K17686 - gmx:100127402 195.282