Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme197425g00001 ATGGCCATCTATTTTCCAGTCATAGGTGAATGGATAAAGAACATATACTTGTTGCTATTGGCACTTTCATCTACTTCCATTGCCATCTTCTTGTTAGTCATCACCTATTCCCCCTCTGATATCAAGTTCCATGTAACTGATGCATCTCTCACAAAGTTCAACCTCACAAACAACAATACCTTGGATTACAAGTTAGAAGCCAACATCACATCAAGAAATCCCAACAAGAATGTCATTGTGTACTACAGGGAGATCACTGCAATTGCATG 269 0.3903 MAIYFPVIGEWIKNIYLLLLALSSTSIAIFLLVITYSPSDIKFHVTDASLTKFNLTNNNTLDYKLEANITSRNPNKNVIVYYREITAIA 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme197425g00001 89 PANTHER OS05G0367900 PROTEIN 12 88 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme197425g00001 Trme-Chr197425 21 289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme197425g00001 39 87 SNARE and Associated Proteins AT1G32270 40.816 4.54e-08 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme197425g00001 - - vvo:131615030 104.375