Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme197297g00001 CCGGCAAGCGTCACCTCGCCTCCGACTCCTGATTCAGCTTCTGATTATTTCTATCCTGCTTCGGCCCCCGCGTCAGCAGCCTGGTGCGTCCGCCCTATTGTGAGTCCTCCTTCTATTGGATTAAACTATGGTTCCGGTTATGGAAACCGTGTTGTGGCTGGAAATGCATTGAATTTGGGAAATTGGGTAGGGACTAGTAATAGTAGTAATANNNNNTNNNNNNNNNNTNNNNNNNNNNCTTTGCATTGTAATGATGGTGTTAATGTGAATGTAAGTGGTTTTTCTTATGGTGGTCATGGTGGAAATAGATCGGTTGATGATGCCAGCGATGATTCAAGTCCGGGTAGGAAAGTTAAATTTTTGTGTAGTTTTGGTGGGAAGATTTTGCCTAGGCCTAGTGATGGTGTGTTGAGATATGTTGGAGGGCAGACAAGGATAATTAGTGT 446 0.4238 PASVTSPPTPDSASDYFYPASAPASAAWCVRPIVSPPSIGLNYGSGYGNRVVAGNALNLGNWVGTSNSSNXXXXXXXXXXLHCNDGVNVNVSGFSYGGHGGNRSVDDASDDSSPGRKVKFLCSFGGKILPRPSDGVLRYVGGQTRIISV 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme197297g00001 149 PANTHER OS05G0427100 PROTEIN-RELATED 109 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme197297g00001 Trme-Chr197297 1 446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme197297g00001 111 149 MAP Kinase Kinase Kinase AT3G46920 74.359 1.54e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme197297g00001 - - cam:101495779 182.57