Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19725g00001 GCTATAGCATCAGGTAGAGCCCGGAGATATGCTGCTGAGCAGGCTATGCGGGGTTGGCACTCACAACGTCTTCTTGGCAATGGTGAAGTTAGTGACCCTATTATAAAGGATCGGAATTCTGTGTCTGTGCAAAAGCGTGAAAAGCAGCTTAAGAGCATCAATATACTTAAACGTAAGAAACCATCTTATATGGATAACGCAGTCAAAGCAGCACGCAGTAAACCATCAAGACCACAGTTGGAAACAGCCGTGGTTGACATTGGACCTCCTGCTGATTGGGTAAAAGTCAATGTACAAAAAACTAAAGATTGTTTCGAGATATATGCTTTAGTTCCTGGCCTTCTGCGGGAAGAGGTACTGCACACTCTGATTGCTTTATCTTACTGTAATATTTAA 396 0.4293 AIASGRARRYAAEQAMRGWHSQRLLGNGEVSDPIIKDRNSVSVQKREKQLKSINILKRKKPSYMDNAVKAARSKPSRPQLETAVVDIGPPADWVKVNVQKTKDCFEIYALVPGLLREEVLHTLIALSYCNI 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19725g00001 131 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 3 119 IPR045147 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19725g00001 Trme-Chr19725 403 1316 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19725g00001 1 119 ARID Transcription Factor Family AT1G76510 57.143 5.37e-33 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme19725g00001 - - psat:127119953 228.409