Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trme19710g00001 | AAGTCTAGGGGTAGGAGATCTCTGGACAAGTCCCAAATACCGAACGTGTCAAAAGATATCAATGTTGACAAGGTTGCGGTGCAGAATTCTCATGTTCAACATGGAAATACGTTTGTTCCTGATGATAATAATTCAGACAAGATATCGATTCATATGAGGACGAGCAAACTCAGTGATCCTGATAGTGCAAGTCATTGCAGTTCAGTTTATCATCACGAGAGAGGATTAAGTGCGCTTTCATGGGAAGAAGGGAGCTCTGGGAATTATAAGAAGCAGTCTACATTGTCATATGGAGGAGGGCCAATGGCTTCTCCCTCTCCTTTGATTGGTTTGCCGGAATTTTCTCATCTTGGTTGGGGCCACTGGTTTACACTTAGAGATCTTGAACAAGCAACCAATTGTTTCTCGGCTGAGAACGTTCTCGGTGAGGGTGGATATGGAGTTGTTTACAAGGGAAGACTGATCAACGGAACCGAGGTTGCAGTGAAGAAACTTCTTAACAACTTGGGACAAGCAGAGAGAGAATTCAGGGTTGAAGTGGAGGCTATAGGCCATGTTAGACATAAGCATCTCGTGCGCCTGCTTGGATATTGCGTAGAAGGAGTTCACAGGCTGCTGGTGTACGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGGGACAAGTACCGACTTGGGACACTTACCTGGGAGGCCCGCATGAAAGTTATACTCGGCACAGCCAAAGCGTAA | 738 | 0.4512 | KSRGRRSLDKSQIPNVSKDINVDKVAVQNSHVQHGNTFVPDDNNSDKISIHMRTSKLSDPDSASHCSSVYHHERGLSALSWEEGSSGNYKKQSTLSYGGGPMASPSPLIGLPEFSHLGWGHWFTLRDLEQATNCFSAENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEREFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGDKYRLGTLTWEARMKVILGTAKA | 245 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trme19710g00001 | 245 | Pfam | Protein tyrosine and serine/threonine kinase | 137 | 239 | IPR001245 | GO:0004672|GO:0006468 | |
Trme19710g00001 | 245 | ProSiteProfiles | Protein kinase domain profile. | 135 | 245 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Trme19710g00001 | 245 | SUPERFAMILY | Protein kinase-like (PK-like) | 115 | 245 | IPR011009 | - | |
Trme19710g00001 | 245 | FunFam | Putative receptor-like protein kinase | 117 | 210 | - | - | |
Trme19710g00001 | 245 | PANTHER | OS01G0323000 PROTEIN | 6 | 245 | - | - | |
Trme19710g00001 | 245 | Gene3D | Phosphorylase Kinase; domain 1 | 117 | 210 | - | - | |
Trme19710g00001 | 245 | ProSitePatterns | Protein kinases ATP-binding region signature. | 141 | 164 | IPR017441 | GO:0005524 | |
Trme19710g00001 | 245 | Coils | Coil | 155 | 175 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trme19710g00001 | Trme-Chr19710 | 146 | 1288 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trme19710g00001 | 110 | 244 | Trihelix Transcription Factor Family | AT1G23540 | 48.529 | 7.60e-37 | 134 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-V | Trme19710g00001 | PK_Tyr_Ser-Thr | 1.4e-16 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trme19710g00001 | - | - | gmx:100798916 | 398.282 |