Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme19695g00001 ATGACAAACCAAAGCTTCTCAGCCGAGGTGTGGTTGCTTCTGCAGTTAACTGCTTTGCTTGCTGAGGTTGGACTAAACATCCAAGAGGCACATGCTTTTTCCACAACTGACGGTTACTCGTTAGACGTGTTTGTTGTTGAAGGATGGCCCTATGAGGAAACAGAGAAGCTCAAAGAAACTTTGGAAAAAGAAGTCTTGAAGATTGAGAGACATGAGAGGTCCAGTCAGCAATCAATATCATCTGTTGATGAACGTGATCAAGCAAGGATGAAAAATGAACTGGATCATTTGACAATTCCAAATGATGGGACAGATGTTTGGGAAATAGATCCTAAACATACATTTGAAATACGGAACTCAAGTTGCATCTGCGTCATACG 380 0.4158 MTNQSFSAEVWLLLQLTALLAEVGLNIQEAHAFSTTDGYSLDVFVVEGWPYEETEKLKETLEKEVLKIERHERSSQQSISSVDERDQARMKNELDHLTIPNDGTDVWEIDPKHTFEIRNSSCICVIR 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme19695g00001 127 SUPERFAMILY ACT-like 12 63 IPR045865 -
Trme19695g00001 127 ProSiteProfiles ACT domain profile. 1 76 IPR002912 -
Trme19695g00001 127 PANTHER BIFUNCTIONAL URIDYLYLTRANSFERASE/URIDYLYL-REMOVING ENZYME 9 100 IPR010043 GO:0006807|GO:0008773
Trme19695g00001 127 Coils Coil 51 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme19695g00001 Trme-Chr19695 46 1098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme19695g00001 12 113 MAP Kinase Kinase Kinase AT4G38470 67.308 1.06e-38 134