Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme196924g00001 GTTCCAATGCAGAGCATAGGATATGCAACATTAGCAAACCTTGCTCCTCAATATGGACTTTATACGAGTGTTGTACCACCGCTTATCTATGCTGTAATGGGAACTTCAAGAGAGATAGCAATTGGTCCAGTGGCAGTGGTTTCCTTGCTGTTATCCTCAATGGTTCAAAAATTAATAGACCCTTCAACTGATCCAATTGGTTATACAAAGCTCATTTTTCTAACTACTCTCTTTGCTGGTATCTTCCAAACTGCGTTTGGACTATTCAGGTGA 273 0.4029 VPMQSIGYATLANLAPQYGLYTSVVPPLIYAVMGTSREIAIGPVAVVSLLLSSMVQKLIDPSTDPIGYTKLIFLTTLFAGIFQTAFGLFR 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme196924g00001 90 ProSitePatterns SLC26A transporters signature. 16 37 IPR018045 GO:0008271|GO:0008272
Trme196924g00001 90 Pfam Sulfate permease family 4 90 IPR011547 GO:0016020
Trme196924g00001 90 PANTHER SULFATE TRANSPORTER 4 90 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme196924g00001 Trme-Chr196924 3 441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme196924g00001 4 90 Inorganic Solute Cotransporters AT5G10180 83.908 1.84e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme196924g00001 K17469 - gmx:100781327 147.517